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Jason Cole
Jason Cole
Deputy Director, CCDC
Verified email at ccdc.cam.ac.uk
Title
Cited by
Cited by
Year
New software for searching the Cambridge Structural Database and visualizing crystal structures
IJ Bruno, JC Cole, PR Edgington, M Kessler, CF Macrae, P McCabe, ...
Acta Crystallographica Section B: Structural Science 58 (3), 389-397, 2002
38012002
Improved protein–ligand docking using GOLD
ML Verdonk, JC Cole, MJ Hartshorn, CW Murray, RD Taylor
Proteins: Structure, Function, and Bioinformatics 52 (4), 609-623, 2003
33182003
Retrieval of crystallographically-derived molecular geometry information
IJ Bruno, JC Cole, M Kessler, J Luo, WDS Motherwell, LH Purkis, ...
Journal of chemical information and computer sciences 44 (6), 2133-2144, 2004
9722004
DASH: a program for crystal structure determination from powder diffraction data
WIF David, K Shankland, J Van De Streek, E Pidcock, WDS Motherwell, ...
Journal of Applied Crystallography 39 (6), 910-915, 2006
5872006
Report on the sixth blind test of organic crystal structure prediction methods
AM Reilly, RI Cooper, CS Adjiman, S Bhattacharya, AD Boese, ...
Acta Crystallographica Section B: Structural Science, Crystal Engineering …, 2016
5782016
A new test set for validating predictions of protein–ligand interaction
JWM Nissink, C Murray, M Hartshorn, ML Verdonk, JC Cole, R Taylor
Proteins: structure, function, and bioinformatics 49 (4), 457-471, 2002
5462002
Modeling water molecules in protein− ligand docking using GOLD
ML Verdonk, G Chessari, JC Cole, MJ Hartshorn, CW Murray, ...
Journal of medicinal chemistry 48 (20), 6504-6515, 2005
4692005
Comparing protein–ligand docking programs is difficult
JC Cole, CW Murray, JWM Nissink, RD Taylor, R Taylor
Proteins: Structure, Function, and Bioinformatics 60 (3), 325-332, 2005
4202005
IsoStar: a library of information about nonbonded interactions
IJ Bruno, JC Cole, JPM Lommerse, RS Rowland, R Taylor, ML Verdonk
Journal of computer-aided molecular design 11, 525-537, 1997
3981997
SuperStar: a knowledge-based approach for identifying interaction sites in proteins
ML Verdonk, JC Cole, R Taylor
Journal of molecular biology 289 (4), 1093-1108, 1999
2751999
Use of molecular docking computational tools in drug discovery
F Stanzione, I Giangreco, JC Cole
Progress in Medicinal Chemistry 60, 273-343, 2021
2562021
Pose prediction and virtual screening performance of GOLD scoring functions in a standardized test
JW Liebeschuetz, JC Cole, O Korb
Journal of computer-aided molecular design 26, 737-748, 2012
1892012
Potential and limitations of ensemble docking
O Korb, TSG Olsson, SJ Bowden, RJ Hall, ML Verdonk, JW Liebeschuetz, ...
Journal of chemical information and modeling 52 (5), 1262-1274, 2012
1862012
SARS-CoV-2 infects the human kidney and drives fibrosis in kidney organoids
J Jansen, KC Reimer, JS Nagai, FS Varghese, GJ Overheul, M de Beer, ...
Cell Stem Cell 29 (2), 217-231. e8, 2022
1692022
WebCSD: the online portal to the Cambridge Structural Database
IR Thomas, IJ Bruno, JC Cole, CF Macrae, E Pidcock, PA Wood
Journal of applied crystallography 43 (2), 362-366, 2010
1532010
Impact of resolving the diurnal cycle in an ocean–atmosphere GCM. Part 2: A diurnally coupled CGCM
DJ Bernie, E Guilyardi, G Madec, JM Slingo, SJ Woolnough, J Cole
Climate dynamics 31, 909-925, 2008
1482008
Tropical and subtropical cloud transitions in weather and climate prediction models: The GCSS/WGNE Pacific Cross-Section Intercomparison (GPCI)
J Teixeira, S Cardoso, M Bonazzola, J Cole, A DelGenio, C DeMott, ...
Journal of Climate 24 (20), 5223-5256, 2011
1392011
SuperStar: improved knowledge-based interaction fields for protein binding sites
ML Verdonk, JC Cole, P Watson, V Gillet, P Willett
Journal of molecular biology 307 (3), 841-859, 2001
1372001
Evaluation of molecular crystal structures using Full Interaction Maps
PA Wood, TSG Olsson, JC Cole, SJ Cottrell, N Feeder, PTA Galek, ...
CrystEngComm 15 (1), 65-72, 2013
1242013
Protein-ligand docking and virtual screening with GOLD
JC Cole, JWM Nissink, R Taylor
Virtual screening in drug discovery 1, 379-415, 2005
1172005
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