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Gavin L. Simpson
Gavin L. Simpson
Assistant Professor, Department of Veterinary and Animal Sciences, Aarhus University
Verified email at anivet.au.dk - Homepage
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Cited by
Cited by
Year
vegan: community ecology package
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O'Hara, ...
31428*2016
Vegan: community ecology package. R package version 2.3-0; 2015
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Scientific Reports 10, 20354, 2020
11457*2020
Package ‘vegan’
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Community ecology package, version 2 (9), 1-295, 2013
82982013
The vegan package
J Oksanen, R Kindt, P Legendre, B O’Hara, MHH Stevens, MJ Oksanen, ...
Community ecology package 10 (631-637), 719, 2007
31922007
vegan: community ecology package. 2019
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
R package version 2 (10), 2015
12922015
Community ecology package
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
R package version 2 (0), 321-326, 2013
11232013
Hierarchical generalized additive models in ecology: an introduction with mgcv
EJ Pedersen, DL Miller, GL Simpson, N Ross
PeerJ 7, e6876, 2019
6822019
Vegan: Community Ecology Package. R version 2.0-3
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, B O’Hara, ...
496*2012
Vegan: community ecology package
FGB Jari Oksanen, M Friendly, R Kindt, P Legendre, D McGlinn, ...
R package version 2 (6), 2018
4782018
Package ‘vegan’. Community ecology package, version 2
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, R O’hara, ...
R Foundation for Statistical Computing, 2013
3962013
Modelling palaeoecological time series using generalised additive models
GL Simpson
Frontiers in Ecology and Evolution 6, 149, 2018
3522018
Vegan: community ecology package version 1.8-6
J Oksanen
http://cran. r-project. org, 2007
3272007
Vegan: community ecology package. R package
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Version, 2017
3032017
vegan: Community Ecology Package. R package version 2.5-2. 2018
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Vienna: R Core Team, 2018
2632018
Looking forward through the past: identification of 50 priority research questions in palaeoecology
AWR Seddon, AW Mackay, AG Baker, HJB Birks, E Breman, CE Buck, ...
Journal of Ecology 102 (1), 256-267, 2014
2562014
Assessing eutrophication and reference conditions for Scottish freshwater lochs using subfossil diatoms
H Bennion, J Fluin, GL Simpson
Journal of Applied Ecology 41 (1), 124-138, 2004
2482004
vegan: community ecology package. R package version 2.0–7. 2013
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
URL, 2014
232*2014
Defining reference conditions and restoration targets for lake ecosystems using palaeolimnology: a synthesis
H Bennion, RW Battarbee, CD Sayer, GL Simpson, TA Davidson
Journal of Paleolimnology 45, 533-544, 2011
2192011
vegan: Community Ecology Package. R package version 2.5-6. 2019
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
2142020
Package'vegan'version 2.0-2
J Oksanen
http://cran. r-project. org, http://vegan. r-forge. r-project. org/, 2011
207*2011
Paleolimnological evidence of the effects on lakes of energy and mass transfer from climate and humans
PR Leavitt, SC Fritz, NJ Anderson, PA Baker, T Blenckner, L Bunting, ...
Limnology and Oceanography 54 (6part2), 2330-2348, 2009
2002009
Analogue methods in palaeoecology: using the analogue package
GL Simpson
Journal of Statistical Software 22, 1-29, 2007
1912007
others (2019) vegan: community ecology package. R package version 2.5-6
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Community ecology package, version, 2017
1882017
Analogue: analogue and weighted averaging methods for palaeoecology
GL Simpson, J Oksanen
R package, 2011
188*2011
gratia: graceful ’ggplot’-based graphics and other functions for GAMs fitted using “mgcv”
GL Simpson
185*2022
vegan: Community Ecology Package. R package version 2.5–7. 2020
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
1812022
permute: Functions for generating restricted permutations of data
GL Simpson
156*2012
An assessment of the mechanisms for the transfer of lead and mercury from atmospherically contaminated organic soils to lake sediments with particular reference to Scotland, UK
NL Rose, H Yang, SD Turner, GL Simpson
Geochimica et cosmochimica acta 82, 113-135, 2012
1532012
vegan
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Community ecology package 2, 5-6, 2019
1482019
Detecting changing river temperatures in England and Wales
HG Orr, GL Simpson, S des Clers, G Watts, M Hughes, J Hannaford, ...
Hydrological Processes 29 (5), 752-766, 2015
1412015
& Wagner HH (2011). vegan: Community ecology package
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O'hara, ...
R package version 2 (4), 25
141*25
Combining limnological and palaeolimnological data to disentangle the effects of nutrient pollution and climate change on lake ecosystems: problems and potential
RW Battarbee, NJ Anderson, H Bennion, GL Simpson
Freshwater biology 57 (10), 2091-2106, 2012
1302012
vegan: Community Ecology Package, 2.4-2
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Online [URL] http://CRAN. R-project. org/package= vegan, 2017
128*2017
Decrease in CO2 efflux from northern hardwater lakes with increasing atmospheric warming
K Finlay, RJ Vogt, MJ Bogard, B Wissel, BM Tutolo, GL Simpson, ...
Nature 519 (7542), 215-218, 2015
1252015
Climate change and the future of freshwater biodiversity in Europe: a primer for policy-makers
B Moss, D Hering, AJ Green, A Aidoud, E Becares, M Beklioglu, ...
Freshwater Reviews 2 (2), 103-130, 2009
1192009
Trends in the hydrochemistry of acid-sensitive surface waters in the UK 1988–2008
DT Monteith, CD Evans, PA Henrys, GL Simpson, IA Malcolm
Ecological Indicators 37, 287-303, 2014
1152014
Ordination methods, diversity analysis and other functions for community and vegetation ecologists
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Vegan: Community Ecol Package, 05-26, 2017
1142017
Diel surface temperature range scales with lake size
RI Woolway, ID Jones, SC Maberly, JR French, DM Livingstone, ...
Plos one 11 (3), e0152466, 2016
1132016
R package Version 2.0-5
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’Hara, ...
Wien: Institute for Statistics and Mathematics, 2012
1132012
Increased variability and sudden ecosystem state change in Lake Winnipeg, Canada, caused by 20th century agriculture
L Bunting, PR Leavitt, GL Simpson, B Wissel, KR Laird, BF Cumming, ...
Limnology and Oceanography 61 (6), 2090-2107, 2016
1122016
andWagner H. 2019. vegan: Community Ecology Package. R package version 2.5-6
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
1042013
neotoma: A Programmatic Interface to the Neotoma Paleoecological Database
S Goring, A Dawson, GL Simpson, K Ram, RW Graham, EC Grimm, ...
Open Quaternary 1 (2), 1-17, 2015
1012015
Vegan: community ecology package. R package vegan, vers. 2.2-1
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Worl. Agro. Cent 3, 7-81, 2015
982015
The use of diatom records to establish reference conditions for UK lakes subject to eutrophication
H Bennion, GL Simpson
Journal of paleolimnology 45, 469-488, 2011
972011
TBT causes regime shift in shallow lakes
CD Sayer, DJ Hoare, GL Simpson, ACG Henderson, ER Liptrot, ...
Environmental Science & Technology 40 (17), 5269-5275, 2006
952006
vegan: Community Ecology Package. 2019. R package version 2.5-6
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
942019
vegan: Community Ecology Package. R package version 2.0-10. 2013
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
There is no corresponding record for this reference, 2015
932015
permute: Functions for generating restricted permutations of data. R package version 0.9-4
GL Simpson
Recuperado de https://CRAN. R-project. org/package= permute, 2016
912016
Deciphering the effect of climate change and separating the influence of confounding factors in sediment core records using additive models
GL Simpson, NJ Anderson
Limnology and Oceanography 54 (6part2), 2529-2541, 2009
912009
Vegan: community ecology package http://CRAN
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O'Hara, ...
R-project. org/package= vegan, 2013
902013
Analogue Methods in Palaeolimnology
GL Simpson
Tracking Environmental Change Using Lake Sediments, 495-522, 2012
902012
A palaeolimnological meta-database for assessing the ecological status of lakes
RW Battarbee, D Morley, H Bennion, GL Simpson, M Hughes, V Bauere
Journal of Paleolimnology 45, 405-414, 2011
902011
Vegan: community ecology package. R Package version 2.4-1. https
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’Hara, ...
CRAN. R-project. org/package= vegan 280, 2016
872016
Vegan: community ecology package.[Google Scholar]
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
862018
vegan: Community Ecology Package, version 2.0–7. R package
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O'Hara, ...
Vienna: R Core Team.[Google Scholar], 2013
862013
2017vegan
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Community Ecology Package. R package version 2.4 4, 0
86
Multivariate analysis of ecological communities in R: vegan tutorial. R package version 1.7
J Oksanen, FG Blanchet, R Kindt, P Legendre, RG O’Hara, GL Simpson, ...
R Foundation for Statistical Computing, Vienna (Austria), 2011
842011
Package “vegan” title community ecology package version 2.5-7
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D Mcglinn, ...
R 2 (7), 1-286, 2020
832020
Vegan: community ecology package (version 2.5-6)
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
The Comprehensive R Archive Network, 2019
82*2019
Reconstructing pre-acidification pH for an acidified Scottish loch: a comparison of palaeolimnological and modelling approaches
RW Battarbee, DT Monteith, S Juggins, CD Evans, A Jenkins, ...
Environmental Pollution 137 (1), 135-149, 2005
822005
vegan: Community Ecology Package. R package version 2.3-5. 2016
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
812017
Multivariate analysis of ecological communities
J Oksanen, FG BLANCHET, R Kindt, P Legendre, RB O’hara, ...
Vegan Tutorial 43, 2015
812015
Terrestrial and aquatic responses to climate change and human impact on the southeastern Tibetan Plateau during the past two centuries
J Wischnewski, A Kramer, Z Kong, AW Mackay, GL Simpson, S Mischke, ...
Global Change Biology, 2011
812011
Holocene el Nińo–southern Oscillation variability reflected in subtropical Australian precipitation
C Barr, J Tibby, MJ Leng, JJ Tyler, ACG Henderson, JT Overpeck, ...
Scientific Reports 9 (1), 1627, 2019
782019
Trends in bulk deposition of acidity in the UK, 1988–2007, assessed using additive models
CJ Curtis, GL Simpson
Ecological Indicators 37, 274-286, 2014
762014
Statistical learning in palaeolimnology
GL Simpson, HJB Birks
Tracking environmental change using lake sediments: Data handling and …, 2012
762012
vegan: Community Ecology Package. R Package Version 2.0–10
RB OHara, GL Simpson, P Solymos, MHH Stevens, H Wagner
752013
Nutrients exert a stronger control than climate on recent diatom communities in Esthwaite Water: evidence from monitoring and palaeolimnological records
X Dong, H Bennion, SC Maberly, CD Sayer, GL Simpson, RW Battarbee
Freshwater Biology 57 (10), 2044-2056, 2012
752012
Vegan: community ecology package (2.5-7)
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Ordination methods, diversity analysis and other functions for community and …, 2020
742020
The role of cladocerans in tracking long-term change in shallow lake trophic status
TA Davidson, H Bennion, E Jeppesen, GH Clarke, CD Sayer, D Morley, ...
Hydrobiologia 676, 299-315, 2011
702011
Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink
JR Webb, NM Hayes, GL Simpson, PR Leavitt, HM Baulch, K Finlay
Proceedings of the National Academy of Sciences 116 (20), 9814-9819, 2019
692019
vegan: Community Ecology Package. R package version 2.2–0. 2014
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O'hara, ...
692014
& Wagner, H.(2013)
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Community ecology package. R package version 2 (0), 321-326, 2011
682011
Vegan: community ecology
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
R package version 2, 4-6, 2018
672018
Assessing degradation and recovery pathways in lakes impacted by eutrophication using the sediment record
H Bennion, GL Simpson, BJ Goldsmith
Frontiers in Ecology and Evolution 3, 94, 2015
672015
Vegan: community ecology package. Version 1.17-9
J Oksanen, FG Blanchet, R Kindt, P Legendre, RB O’hara, GL Simpson, ...
R Project for Statistical Computing, Vienna, 2011
672011
Vegan: community ecology package
GL Simpson, P Solymos, M Stevens, H Wagner
R package version, 117-4, 2010
672010
Package Vegan: Community ecology package, version 2.0 10
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
Available from CRAN at https://CRAN. R-project. org/package= vegan, 2013
642013
Vegan: community ecology package [WWW document]
J Oksanen, FG Blanchet, R Kindt, P Legendre, RG O’Hara, GL Simpson, ...
URL http://cran. r-project. org/package= vegan (accessed 01.25. 11), 2011
63*2011
Defining reference conditions for acidified waters using a modern analogue approach
GL Simpson, EM Shilland, JM Winterbottom, J Keay
Environmental Pollution 137 (1), 119-133, 2005
632005
Recovery of UK lakes from acidification: An assessment using combined palaeoecological and contemporary diatom assemblage data
RW Battarbee, GL Simpson, EM Shilland, RJ Flower, A Kreiser, H Yang, ...
Ecological indicators 37, 365-380, 2014
582014
vegan: Community Ecology Package. R package version 2.4–3. 2017
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Google Scholar There is no corresponding record for this reference, 2017
572017
Evidence of recovery from acidification in the macroinvertebrate assemblages of UK fresh waters: a 20-year time series
JF Murphy, JH Winterbottom, S Orton, GL Simpson, EM Shilland, ...
Ecological Indicators 37, 330-340, 2014
572014
Vegan: community ecology package. R package version 2.0-10
SGL RB, P Solymos, MHH Stevens, H Wagner
562013
Defining ecological and chemical reference conditions and restoration targets for nine European lakes
H Bennion, GL Simpson, N John Anderson, G Clarke, X Dong, A Hobęk, ...
Journal of Paleolimnology 45, 415-431, 2011
562011
Identifying from recent sediment records the effects of nutrients and climate on diatom dynamics in Loch Leven
H BENNION, L CARVALHO, CD SAYER, GL SIMPSON, J WISCHNEWSKI
Freshwater Biology, 2011
562011
Vegan: community ecology package. R package version 2.0-10
GL Simpson, P Solymos, MHH Stevens, H Wagner
552013
vegan: Community Ecology Package. R package version 2.4-1. 2016
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
Google Scholar There is no corresponding record for this reference, 2016
542016
Vegan: Community Ecology Package. R Package Version 2.4. 4 (2017)
J Oksanen, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
522017
ggvegan:‘ggplot2’Plots for the ‘vegan’Package
GL Simpson
R package version 00–3, 2015
512015
Palaeolimnological assessment of lake acidification and environmental change in the Athabasca Oil Sands Region, Alberta
CJ Curtis, RJ Flower, N Rose, J Shilland, GL Simpson, S Turner, H Yang, ...
Istituto italiano di idrobiologia (Pallanza, Italia), 2010
512010
Package ‘vegan’—Community ecology package. 2019
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’hara, ...
View Article, 2018
502018
Vegan: community ecology package. R package 2.0. 3
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’Hara, ...
Version 2, 3, 2016
472016
Vegan: Community Ecology Package, R Package Version 2.0-2
J Okansen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’Hara, ...
462011
Spatial and temporal variation in nitrogen fixation and its importance to phytoplankton in phosphorus‐rich lakes
NM Hayes, A Patoine, HA Haig, GL Simpson, VJ Swarbrick, E Wiik, ...
Freshwater Biology 64 (2), 269-283, 2019
452019
Differential stimulation and suppression of phytoplankton growth by ammonium enrichment in eutrophic hardwater lakes over 16 years
VJ Swarbrick, GL Simpson, PM Glibert, PR Leavitt
Limnology and Oceanography 64 (S1), S130-S149, 2019
442019
Harnessing the potential of the multi‐indicator palaeoecological approach: an assessment of the nature and causes of ecological change in a eutrophic shallow lake
H Bennion, TA Davidson, CD Sayer, GL Simpson, NL Rose, JP Sadler
Freshwater Biology 60 (7), 1423-1442, 2015
432015
Vegan: Community Ecology Package. 2013. R-package version 2.0-10
J Oksanen, FG Blanchet, R Kindt, P Legendre, PR Minchin, RB O’Hara, ...
432013
vegan: Community Ecology Package. R package version 2.5-6
O Jari, FG Blanchet, M Friendly, R Kindt, P Legendre, D McGlinn, ...
412019
A reference typology of low alkalinity lakes in the UK based on pre-acidification diatom assemblages from lake sediment cores
RW Battarbee, GL Simpson, H Bennion, C Curtis
Journal of Paleolimnology 45, 489-505, 2011
412011
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