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Emily Clark
Emily Clark
Chancellor's Fellow, The Roslin Institute, University of Edinburgh
Verified email at roslin.ed.ac.uk - Homepage
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Cited by
Year
A high resolution atlas of gene expression in the domestic sheep (Ovis aries)
EL Clark, SJ Bush, MEB McCulloch, IL Farquhar, R Young, L Lefevre, ...
PLoS genetics 13 (9), e1006997, 2017
1392017
A high resolution atlas of gene expression in the domestic sheep (Ovis aries)
EL Clark, SJ Bush, MEB McCulloch, IL Farquhar, R Young, L Lefevre, ...
PLoS genetics 13 (9), e1006997, 2017
1392017
Population, genetic, and antigenic diversity of the apicomplexan Eimeria tenella and their relevance to vaccine development
DP Blake, EL Clark, SE Macdonald, V Thenmozhi, K Kundu, R Garg, ...
Proceedings of the National Academy of Sciences 112 (38), E5343-E5350, 2015
1222015
ADGRE1 (EMR1, F4/80) is a rapidly-evolving gene expressed in mammalian monocyte-macrophages
LA Waddell, L Lefevre, SJ Bush, A Raper, R Young, ZM Lisowski, ...
Frontiers in immunology 9, 414893, 2018
1032018
Genomic diversity affects the accuracy of bacterial single-nucleotide polymorphism–calling pipelines
SJ Bush, D Foster, DW Eyre, EL Clark, N De Maio, LP Shaw, N Stoesser, ...
Gigascience 9 (2), giaa007, 2020
962020
Insect endosymbionts: manipulators of insect herbivore trophic interactions?
EL Clark, AJ Karley, SF Hubbard
Protoplasma 244, 25-51, 2010
892010
From FAANG to fork: application of highly annotated genomes to improve farmed animal production
EL Clark, AL Archibald, HD Daetwyler, MAM Groenen, PW Harrison, ...
Genome Biology 21, 1-9, 2020
832020
Cryptic Eimeria genotypes are common across the southern but not northern hemisphere
EL Clark, SE Macdonald, V Thenmozhi, K Kundu, R Garg, S Kumar, ...
International journal for parasitology 46 (9), 537-544, 2016
832016
An optimised protocol for molecular identification of Eimeria from chickens
S Kumar, R Garg, A Moftah, EL Clark, SE Macdonald, AS Chaudhry, ...
Veterinary parasitology 199 (1-2), 24-31, 2014
812014
Are Eimeria genetically diverse, and does it matter?
EL Clark, FM Tomley, DP Blake
Trends in Parasitology 33 (3), 231-241, 2017
642017
Eimeria species occurrence varies between geographic regions and poultry production systems and may influence parasite genetic diversity
BC Prakashbabu, V Thenmozhi, G Limon, K Kundu, S Kumar, R Garg, ...
Veterinary parasitology 233, 62-72, 2017
642017
The genomic architecture of mastitis resistance in dairy sheep
G Banos, G Bramis, SJ Bush, EL Clark, MEB McCulloch, J Smith, ...
BMC genomics 18, 1-18, 2017
562017
Species-specific transcriptional regulation of genes involved in nitric oxide production and arginine metabolism in macrophages
R Young, SJ Bush, L Lefevre, MEB McCulloch, ZM Lisowski, C Muriuki, ...
Immunohorizons 2 (1), 27-37, 2018
422018
Occurrence of Eimeria species parasites on small-scale commercial chicken farms in Africa and indication of economic profitability
KM Fornace, EL Clark, SE Macdonald, B Namangala, E Karimuribo, ...
PLoS One 8 (12), e84254, 2013
412013
Integration of quantitated expression estimates from polyA-selected and rRNA-depleted RNA-seq libraries
SJ Bush, MEB McCulloch, KM Summers, DA Hume, EL Clark
BMC bioinformatics 18, 1-12, 2017
352017
Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome
SJ Bush, C Muriuki, MEB McCulloch, IL Farquhar, EL Clark, DA Hume
Genetics Selection Evolution 50, 1-17, 2018
322018
Mentoring students back on-track to graduation: Program results from five communities
MA Mac Iver, S Sheldon, S Naeger, E Clark
Education and Urban Society 49 (7), 643-675, 2017
322017
An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
KM Davenport, DM Bickhart, K Worley, SC Murali, M Salavati, EL Clark, ...
Gigascience 11, giab096, 2022
302022
Elimination of reference mapping bias reveals robust immune related allele-specific expression in crossbred sheep
M Salavati, SJ Bush, S Palma-Vera, MEB McCulloch, DA Hume, EL Clark
Frontiers in genetics 10, 467947, 2019
292019
Species-specificity of transcriptional regulation and the response to lipopolysaccharide in mammalian macrophages
SJ Bush, MEB McCulloch, ZM Lisowski, C Muriuki, EL Clark, R Young, ...
Frontiers in Cell and Developmental Biology 8, 661, 2020
282020
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