Follow
Evgenia Nikolova
Title
Cited by
Cited by
Year
Transient Hoogsteen base pairs in canonical duplex DNA
EN Nikolova, E Kim, AA Wise, PJ O’Brien, I Andricioaei, HM Al-Hashimi
Nature 470 (7335), 498-502, 2011
3822011
Characterizing RNA dynamics at atomic resolution using solution-state NMR spectroscopy
JR Bothe, EN Nikolova, CD Eichhorn, J Chugh, AL Hansen, ...
Nature methods 8 (11), 919-931, 2011
1772011
A historical account of hoogsteen base‐pairs in duplex DNA
EN Nikolova, H Zhou, FL Gottardo, HS Alvey, IJ Kimsey, HM Al‐Hashimi
Biopolymers 99 (12), 955-968, 2013
1322013
Extending the Range of Microsecond-to-Millisecond Chemical Exchange Detected in Labeled and Unlabeled Nucleic Acids by Selective Carbon R NMR …
AL Hansen, EN Nikolova, A Casiano-Negroni, HM Al-Hashimi
Journal of the American Chemical Society 131 (11), 3818-3819, 2009
1322009
m1A and m1G disrupt A-RNA structure through the intrinsic instability of Hoogsteen base pairs
H Zhou, IJ Kimsey, EN Nikolova, B Sathyamoorthy, G Grazioli, J McSally, ...
Nature structural & molecular biology 23 (9), 803-810, 2016
1192016
Characterizing the protonation state of cytosine in transient G· C Hoogsteen base pairs in duplex DNA
EN Nikolova, GB Goh, CL Brooks III, HM Al-Hashimi
Journal of the American Chemical Society 135 (18), 6766-6769, 2013
1132013
Widespread transient Hoogsteen base pairs in canonical duplex DNA with variable energetics
HS Alvey, FL Gottardo, EN Nikolova, HM Al-Hashimi
Nature communications 5 (1), 4786, 2014
1102014
Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution
EN Nikolova, FL Gottardo, HM Al-Hashimi
Journal of the American Chemical Society 134 (8), 3667-3670, 2012
962012
Single VS ribozyme molecules reveal dynamic and hierarchical folding toward catalysis
MJB Pereira, EN Nikolova, SL Hiley, D Jaikaran, RA Collins, NG Walter
Journal of molecular biology 382 (2), 496-509, 2008
712008
Probing Sequence-Specific DNA Flexibility in A-Tracts and Pyrimidine-Purine Steps by Nuclear Magnetic Resonance 13C Relaxation and Molecular Dynamics …
EN Nikolova, GD Bascom, I Andricioaei, HM Al-Hashimi
Biochemistry 51 (43), 8654-8664, 2012
552012
Modulating RNA alignment using directional dynamic kinks: application in determining an atomic-resolution ensemble for a hairpin using NMR residual dipolar couplings
L Salmon, GM Giambasu, EN Nikolova, K Petzold, A Bhattacharya, ...
Journal of the American Chemical Society 137 (40), 12954-12965, 2015
372015
CH··· O hydrogen bonds mediate highly specific recognition of methylated CpG sites by the zinc finger protein kaiso
EN Nikolova, RL Stanfield, HJ Dyson, PE Wright
Biochemistry 57 (14), 2109-2120, 2018
292018
Intrinsic dynamics of DNA–polymer complexes: a mechanism for DNA release
LE Prevette, EN Nikolova, HM Al-Hashimi, MM Banaszak Holl
Molecular pharmaceutics 9 (9), 2743-2749, 2012
252012
Thermodynamics of RNA melting, one base pair at a time
EN Nikolova, HM Al-Hashimi
RNA 16 (9), 1687-1691, 2010
212010
Preparation, resonance assignment, and preliminary dynamics characterization of residue specific 13C/15N-labeled elongated DNA for the study of sequence …
EN Nikolova, HM Al-Hashimi
Journal of biomolecular NMR 45, 9-16, 2009
212009
Guanine to inosine substitution leads to large increases in the population of a transient G· C hoogsteen base pair
EN Nikolova, F Stull, HM Al-Hashimi
Biochemistry 53 (46), 7145-7147, 2014
132014
A conformational switch in the zinc finger protein Kaiso mediates differential readout of specific and methylated DNA sequences
EN Nikolova, RL Stanfield, HJ Dyson, PE Wright
Biochemistry 59 (20), 1909-1926, 2020
82020
Structural plasticity of pioneer factor Sox2 and DNA bendability modulate nucleosome engagement and Sox2-Oct4 synergism
FCM Gadea, EN Nikolova
Journal of Molecular Biology 435 (2), 167916, 2023
52023
Nucleosome topology and DNA sequence modulate the engagement of pioneer factors SOX2 and OCT4
FCM Gadea, EN Nikolova
BioRxiv, 2022.01. 18.476780, 2022
22022
The Double Helix in Motion: New Insights into Sequence-specific, Functional DNA Dynamics Using NMR Spectroscopy
EN Nikolova
University of Michigan, 2011
22011
The system can't perform the operation now. Try again later.
Articles 1–20