| ProteomeXchange provides globally coordinated proteomics data submission and dissemination JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Rios, ... Nature biotechnology 32 (3), 223-226, 2014 | 1173 | 2014 |
| Cytogenetic alterations and cytokeratin expression patterns in breast cancer: integrating a new model of breast differentiation into cytogenetic pathways of breast carcinogenesis E Korsching, J Packeisen, K Agelopoulos, M Eisenacher, R Voss, J Isola, ... Laboratory investigation 82 (11), 1525-1533, 2002 | 279 | 2002 |
| A HUPO test sample study reveals common problems in mass spectrometry–based proteomics AW Bell, EW Deutsch, CE Au, RE Kearney, R Beavis, S Sechi, T Nilsson, ... Nature methods 6 (6), 423-430, 2009 | 263 | 2009 |
| Glucocorticoids induce differentiation of a specifically activated, anti-inflammatory subtype of human monocytes J Ehrchen, L Steinmüller, K Barczyk, K Tenbrock, W Nacken, ... Blood 109 (3), 1265-1274, 2007 | 243 | 2007 |
| Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling S Wiese, T Gronemeyer, R Ofman, M Kunze, CP Grou, JA Almeida, ... Molecular & Cellular Proteomics 6 (12), 2045-2057, 2007 | 164 | 2007 |
| The mzIdentML data standard for mass spectrometry-based proteomics results AR Jones, M Eisenacher, G Mayer, O Kohlbacher, J Siepen, SJ Hubbard, ... Molecular & Cellular Proteomics 11 (7), M111. 014381, 2012 | 129 | 2012 |
| Study of early leaf senescence in Arabidopsis thaliana by quantitative proteomics using reciprocal 14N/15N labeling and difference gel electrophoresis R Hebeler, S Oeljeklaus, KA Reidegeld, M Eisenacher, C Stephan, ... Molecular & Cellular Proteomics 7 (1), 108-120, 2008 | 89 | 2008 |
| Stable interference of EWS–FLI1 in an Ewing sarcoma cell line impairs IGF-1/IGF-1R signalling and reveals TOPK as a new target D Herrero-Martín, D Osuna, JL Ordonez, V Sevillano, AS Martins, ... British journal of cancer 101 (1), 80-90, 2009 | 86 | 2009 |
| Microarray analysis of Ewing’s sarcoma family of tumours reveals characteristic gene expression signatures associated with metastasis and resistance to chemotherapy KL Schaefer, M Eisenacher, Y Braun, K Brachwitz, DH Wai, U Dirksen, ... European journal of cancer 44 (5), 699-709, 2008 | 77 | 2008 |
| An easy‐to‐use Decoy Database Builder software tool, implementing different decoy strategies for false discovery rate calculation in automated MS/MS protein identifications KA Reidegeld, M Eisenacher, M Kohl, D Chamrad, G Körting, M Blüggel, ... Proteomics 8 (6), 1129-1137, 2008 | 71 | 2008 |
| Expression profiling of t (12; 22) positive clear cell sarcoma of soft tissue cell lines reveals characteristic up-regulation of potential new marker genes including ERBB3 KL Schaefer, K Brachwitz, DH Wai, Y Braun, R Diallo, E Korsching, ... Cancer research 64 (10), 3395-3405, 2004 | 67 | 2004 |
| Reporter metabolite analysis of transcriptional profiles of a Staphylococcus aureus strain with normal phenotype and its isogenic hemB mutant displaying the small-colony-variant phenotype J Seggewiß, K Becker, O Kotte, M Eisenacher, MRK Yazdi, A Fischer, ... Journal of bacteriology 188 (22), 7765-7777, 2006 | 66 | 2006 |
| Proteomic differences between hepatocellular carcinoma and nontumorous liver tissue investigated by a combined gel-based and label-free quantitative proteomics study DA Megger, T Bracht, M Kohl, M Ahrens, W Naboulsi, F Weber, ... Molecular & Cellular Proteomics 12 (7), 2006-2020, 2013 | 57 | 2013 |
| Distinction between human cytochrome P450 (CYP) isoforms and identification of new phosphorylation sites by mass spectrometry G Redlich, UM Zanger, S Riedmaier, N Bache, ABM Giessing, ... Journal of proteome research 7 (11), 4678-4688, 2008 | 56 | 2008 |
| Gene expression in periodontal tissues following treatment T Beikler, U Peters, K Prior, M Eisenacher, TF Flemmig BMC medical genomics 1 (1), 30, 2008 | 50 | 2008 |
| The mzQuantML data standard for mass spectrometry–based quantitative studies in proteomics M Walzer, D Qi, G Mayer, J Uszkoreit, M Eisenacher, T Sachsenberg, ... Molecular & Cellular Proteomics 12 (8), 2332-2340, 2013 | 49 | 2013 |
| The HUPO proteomics standards initiative-mass spectrometry controlled vocabulary G Mayer, L Montecchi-Palazzi, D Ovelleiro, AR Jones, PA Binz, ... Database 2013, bat009, 2013 | 42 | 2013 |
| Peek a peak: a glance at statistics for quantitative label-free proteomics K Podwojski, M Eisenacher, M Kohl, M Turewicz, HE Meyer, ... Expert review of proteomics 7 (2), 249-261, 2010 | 42 | 2010 |
| Sense and nonsense of pathway analysis software in proteomics T Müller, A Schrötter, C Loosse, S Helling, C Stephan, M Ahrens, ... Journal of proteome research 10 (12), 5398-5408, 2011 | 40 | 2011 |
| Using laboratory information management systems as central part of a proteomics data workflow C Stephan, M Kohl, M Turewicz, K Podwojski, HE Meyer, M Eisenacher Proteomics 10 (6), 1230-1249, 2010 | 36 | 2010 |