| ProteomeXchange provides globally coordinated proteomics data submission and dissemination JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Rios, ... Nature biotechnology 32 (3), 223-226, 2014 | 1173 | 2014 |
| The minimum information about a proteomics experiment (MIAPE) CF Taylor, NW Paton, KS Lilley, PA Binz, RK Julian, AR Jones, W Zhu, ... Nature biotechnology 25 (8), 887-893, 2007 | 589 | 2007 |
| Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations FF Gonzalez-Galarza, S Christmas, D Middleton, AR Jones Nucleic acids research 39 (suppl_1), D913-D919, 2010 | 582 | 2010 |
| Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations FF González-Galarza, LYC Takeshita, EJM Santos, F Kempson, ... Nucleic acids research 43 (D1), D784-D788, 2014 | 159 | 2014 |
| Data access and integration in the ISPIDER Proteomics Grid L Zamboulis, H Fan, K Belhajjame, J Siepen, A Jones, N Martin, ... International Workshop on Data Integration in the Life Sciences, 3-18, 2006 | 153 | 2006 |
| The mzIdentML data standard for mass spectrometry-based proteomics results AR Jones, M Eisenacher, G Mayer, O Kohlbacher, J Siepen, SJ Hubbard, ... Molecular & Cellular Proteomics 11 (7), M111. 014381, 2012 | 129 | 2012 |
| The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics AR Jones, M Miller, R Aebersold, R Apweiler, CA Ball, A Brazma, ... Nature biotechnology 25 (10), 1127-1133, 2007 | 115 | 2007 |
| The proteome of Toxoplasma gondii: integration with the genome provides novel insights into gene expression and annotation D Xia, SJ Sanderson, AR Jones, JH Prieto, JR Yates, E Bromley, ... Genome biology 9 (7), R116, 2008 | 99 | 2008 |
| Modulation of the host cell proteome by the intracellular apicomplexan parasite Toxoplasma gondii MM Nelson, AR Jones, JC Carmen, AP Sinai, R Burchmore, JM Wastling Infection and immunity 76 (2), 828-844, 2008 | 81 | 2008 |
| Improving sensitivity in proteome studies by analysis of false discovery rates for multiple search engines AR Jones, JA Siepen, SJ Hubbard, NW Paton Proteomics 9 (5), 1220-1229, 2009 | 75 | 2009 |
| Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO‐Proteomics Standards Initiative April 23–25, 2007 Ecole Nationale Supérieure (ENS), Lyon, France S Orchard, L Montechi‐Palazzi, EW Deutsch, PA Binz, AR Jones, N Paton, ... Proteomics 7 (19), 3436-3440, 2007 | 55 | 2007 |
| Capture and analysis of quantitative proteomic data KW Lau, AR Jones, N Swainston, JA Siepen, SJ Hubbard Proteomics 7 (16), 2787-2799, 2007 | 52 | 2007 |
| Visualisation and analysis of proteomic data from the procyclic form of Trypanosoma brucei A Jones, A Faldas, A Foucher, E Hunt, A Tait, JM Wastling, CM Turner Proteomics 6 (1), 259-267, 2006 | 52 | 2006 |
| The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience J Griss, AR Jones, T Sachsenberg, M Walzer, L Gatto, J Hartler, ... Molecular & Cellular Proteomics 13 (10), 2765-2775, 2014 | 51 | 2014 |
| The mzQuantML data standard for mass spectrometry–based quantitative studies in proteomics M Walzer, D Qi, G Mayer, J Uszkoreit, M Eisenacher, T Sachsenberg, ... Molecular & Cellular Proteomics 12 (8), 2332-2340, 2013 | 49 | 2013 |
| Guidelines for reporting the use of gel electrophoresis in proteomics F Gibson, L Anderson, G Babnigg, M Baker, M Berth, PA Binz, A Borthwick, ... Nature biotechnology 26 (8), 863-864, 2008 | 49 | 2008 |
| An object model and database for functional genomics A Jones, E Hunt, JM Wastling, A Pizarro, CJ Stoeckert Jr Bioinformatics 20 (10), 1583-1590, 2004 | 48 | 2004 |
| The PSI semantic validator: a framework to check MIAPE compliance of proteomics data L Montecchi‐Palazzi, S Kerrien, F Reisinger, B Aranda, AR Jones, ... Proteomics 9 (22), 5112-5119, 2009 | 44 | 2009 |
| The HUPO proteomics standards initiative-mass spectrometry controlled vocabulary G Mayer, L Montecchi-Palazzi, D Ovelleiro, AR Jones, PA Binz, ... Database 2013, bat009, 2013 | 42 | 2013 |
| A critical appraisal of techniques, software packages, and standards for quantitative proteomic analysis FF Gonzalez-Galarza, C Lawless, SJ Hubbard, J Fan, C Bessant, ... Omics: a journal of integrative biology 16 (9), 431-442, 2012 | 42 | 2012 |