| Scaling molecular dynamics beyond 100,000 processor cores for large-scale biophysical simulations. J Jung, W Nishima, M Daniels, G Bascom, C Kobayashi, A Adedoyin, ... Journal of Computational Chemistry, 2019 | 120 | 2019 |
| “Raindrop” coalescence of polymer chains during coil–globule transition A Lappala, EM Terentjev Macromolecules 46 (3), 1239-1247, 2013 | 32 | 2013 |
| Maximum compaction density of folded semiflexible polymers A Lappala, EM Terentjev Macromolecules 46 (17), 7125-7131, 2013 | 23 | 2013 |
| Polymer glass transition occurs at the marginal rigidity point with connectivity z*= 4 A Lappala, A Zaccone, EM Terentjev Soft Matter 12 (35), 7330-7337, 2016 | 18 | 2016 |
| Four-dimensional chromosome reconstruction elucidates the spatiotemporal reorganization of the mammalian X chromosome A Lappala, CY Wang, A Kriz, H Michalk, K Tan, JT Lee, KY Sanbonmatsu Proceedings of the National Academy of Sciences 118 (42), e2107092118, 2021 | 15 | 2021 |
| Connectivity and free-surface effects in polymer glasses A Lappala, L Sefton, PW Fenimore, EM Terentjev Scientific Reports 9 (1), 3830, 2019 | 15 | 2019 |
| Structural transition and antibody binding of EBOV GP and ZIKV E proteins from pre-fusion to fusion-initiation state A Lappala, W Nishima, J Miner, P Fenimore, W Fischer, P Hraber, ... Biomolecules 8 (2), 25, 2018 | 9 | 2018 |
| Ratcheted diffusion transport through crowded nanochannels A Lappala, A Zaccone, EM Terentjev Scientific Reports 3, 3103, 2013 | 9 | 2013 |
| Arrested spinodal decomposition in polymer brush collapsing in poor solvent A Lappala, S Mendiratta, EM Terentjev Macromolecules 48 (6), 1894-1900, 2015 | 8 | 2015 |
| Revealing RCOR2 as a regulatory component of nuclear speckles C Rivera, D Verbel-Vergara, D Arancibia, A Lappala, M González, ... Epigenetics & Chromatin 14, 1-15, 2021 | 6 | 2021 |
| Unveiling RCOR1 as a rheostat at transcriptionally permissive chromatin C Rivera, HG Lee, A Lappala, D Wang, V Noches, M Olivares-Costa, ... Nature Communications 13 (1), 1550, 2022 | 5 | 2022 |
| Modeling the Influenza A NP-vRNA-Polymerase Complex in Atomic Detail JC Miner, A Lappala, PW Fenimore, WM Fischer, BH McMahon, ... Biomolecules 11 (1), 124, 2021 | 4 | 2021 |
| Cooperative Motions and Topology-Driven Dynamical Arrest in Prime Knots HJ Park, A Lappala arXiv preprint arXiv:2211.01605, 2022 | 1 | 2022 |
| 4D Chromosome Organization: Combining Polymer Physics, Knot Theory and High Performance Computing A Lappala, J Lee, K Tan, K Sanbonmatsu APS March Meeting Abstracts 2022, W06. 007, 2022 | 1 | 2022 |
| Folding nano-scale paper cranes–the power of origami and kirigami in metamaterials A Lappala, N Macauley International Journal of Biosensors & Bioelectronics 4 (LA-UR-18-25179), 2018 | 1 | 2018 |
| Human Coronavirus Infection Reorganizes Spatial Genomic Architecture in Permissive Lung Cells. K Sanbonmatsu, A Singhal, C Roth, SN Micheva-Viteva, V Venu, ... | | 2024 |
| Topology-Driven Dynamics and Randomness Control in Prime Knots HJ Park, A Lappala Bulletin of the American Physical Society, 2024 | | 2024 |
| Polymer modelling accurately predicts three-dimensional chromosome reorganization with a seasonal coronavirus infection A Singhal, C Roth, S Micheva-Viteva, A Lappala, JT Lee, SR Starkenburg, ... Biophysical Journal 122 (3), 495a, 2023 | | 2023 |
| 3D Dynamics Simulations of Sea Fan Structures A Vlad, A Radja, A Lappala Bulletin of the American Physical Society, 2022 | | 2022 |
| Dynamic 3D Simulations of Tree and Network Sea Fan Structures AD Vlad, A Radja, A Lappala APS March Meeting Abstracts 2022, D47. 009, 2022 | | 2022 |
