Benjamin Schuster-Böckler
Benjamin Schuster-Böckler
Group leader, Ludwig Institute for Cancer Research, Big Data Institute, Oxford, UK
Verified email at - Homepage
Cited by
Cited by
Pfam: clans, web tools and services
RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ...
Nucleic acids research 34 (suppl_1), D247-D251, 2006
Chromatin organization is a major influence on regional mutation rates in human cancer cells
B Schuster-Böckler, B Lehner
nature 488 (7412), 504-507, 2012
HMM Logos for visualization of protein families
B Schuster-Böckler, J Schultz, S Rahmann
BMC bioinformatics 5 (1), 1-8, 2004
Large-scale screening for novel low-affinity extracellular protein interactions
KM Bushell, C Söllner, B Schuster-Boeckler, A Bateman, GJ Wright
Genome research 18 (4), 622-630, 2008
Protein interactions in human genetic diseases
B Schuster-Böckler, A Bateman
Genome biology 9 (1), 1-12, 2008
The importance of p53 pathway genetics in inherited and somatic cancer genomes
G Stracquadanio, X Wang, MD Wallace, AM Grawenda, P Zhang, J Hewitt, ...
Nature reviews Cancer 16 (4), 251, 2016
Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution
Y Liu, P Siejka-Zielińska, G Velikova, Y Bi, F Yuan, M Tomkova, C Bai, ...
Nature biotechnology 37 (4), 424-429, 2019
Dosage sensitivity shapes the evolution of copy-number varied regions
B Schuster-Böckler, D Conrad, A Bateman
PloS one 5 (3), e9474, 2010
An introduction to hidden Markov models
B Schuster‐Böckler, A Bateman
Current protocols in bioinformatics 18 (1), A. 3A. 1-A. 3A. 9, 2007
The effects of mutational processes and selection on driver mutations across cancer types
D Temko, IPM Tomlinson, S Severini, B Schuster-Böckler, TA Graham
Nature communications 9 (1), 1-10, 2018
Mutational signature distribution varies with DNA replication timing and strand asymmetry
M Tomkova, J Tomek, S Kriaucionis, B Schuster-Böckler
Genome biology 19 (1), 1-12, 2018
Reuse of structural domain–domain interactions in protein networks
B Schuster-Böckler, A Bateman
BMC bioinformatics 8 (1), 1-11, 2007
Visualizing profile–profile alignment: pairwise HMM logos
B Schuster-Böckler, A Bateman
Bioinformatics 21 (12), 2912-2913, 2005
Single cell RNA-seq reveals profound transcriptional similarity between Barrett’s oesophagus and oesophageal submucosal glands
RP Owen, MJ White, DT Severson, B Braden, A Bailey, R Goldin, ...
Nature communications 9 (1), 1-12, 2018
5-hydroxymethylcytosine marks regions with reduced mutation frequency in human DNA
M Tomkova, M McClellan, S Kriaucionis, B Schuster-Boeckler
Elife 5, e17082, 2016
DNA modifications: naturally more error prone?
M Tomkova, B Schuster-Böckler
Trends in Genetics 34 (8), 627-638, 2018
BEARscc determines robustness of single-cell clusters using simulated technical replicates
DT Severson, RP Owen, MJ White, X Lu, B Schuster-Boeckler
Nature communications 9 (1), 1-7, 2018
University of Oxford
JL Liu, P Siejka-Zielińska, G Velikova, Y Bi, F Yuan, M Tomkova, ...
United Kingdom, 2007
DNA Replication and associated repair pathways are involved in the mutagenesis of methylated cytosine
M Tomkova, M McClellan, S Kriaucionis, B Schuster-Böckler
DNA repair 62, 1-7, 2018
Tuning transcription factor availability through acetylation-mediated genomic redistribution
P Louphrasitthiphol, R Siddaway, A Loffreda, V Pogenberg, ...
Molecular cell 79 (3), 472-487. e10, 2020
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