Philip L F Johnson
TitleCited byYear
Finishing the euchromatic sequence of the human genome
International Human Genome Sequencing Consortium
Nature 431 (7011), 931, 2004
35962004
A draft sequence of the Neandertal genome
RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ...
science 328 (5979), 710-722, 2010
29022010
Genetic history of an archaic hominin group from Denisova Cave in Siberia
D Reich, RE Green, M Kircher, J Krause, N Patterson, EY Durand, B Viola, ...
Nature 468 (7327), 1053, 2010
13792010
The complete genome sequence of a Neanderthal from the Altai Mountains
K Prüfer, F Racimo, N Patterson, F Jay, S Sankararaman, S Sawyer, ...
Nature 505 (7481), 43, 2014
12152014
Genome sequence of a 45,000-year-old modern human from western Siberia
Q Fu, H Li, P Moorjani, F Jay, SM Slepchenko, AA Bondarev, ...
Nature 514 (7523), 445, 2014
5592014
Patterns of damage in genomic DNA sequences from a Neandertal
AW Briggs, U Stenzel, PLF Johnson, RE Green, J Kelso, K Prüfer, ...
Proceedings of the National Academy of Sciences 104 (37), 14616-14621, 2007
5562007
A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing
RE Green, AS Malaspinas, J Krause, AW Briggs, PLF Johnson, C Uhler, ...
Cell 134 (3), 416-426, 2008
5342008
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ...
Nature 499 (7456), 74, 2013
4912013
mapDamage2. 0: fast approximate Bayesian estimates of ancient DNA damage parameters
H Jónsson, A Ginolhac, M Schubert, PLF Johnson, L Orlando
Bioinformatics 29 (13), 1682-1684, 2013
4102013
Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors
ML Bulyk, PLF Johnson, GM Church
Nucleic acids research 30 (5), 1255-1261, 2002
3812002
Assuring the quality of next-generation sequencing in clinical laboratory practice
AS Gargis, L Kalman, MW Berry, DP Bick, DP Dimmock, T Hambuch, F Lu, ...
Nature biotechnology 30 (11), 1033, 2012
3762012
A revised timescale for human evolution based on ancient mitochondrial genomes
Q Fu, A Mittnik, PLF Johnson, K Bos, M Lari, R Bollongino, C Sun, ...
Current biology 23 (7), 553-559, 2013
3462013
Targeted investigation of the Neandertal genome by array-based sequence capture
HA Burbano, E Hodges, RE Green, AW Briggs, J Krause, M Meyer, ...
science 328 (5979), 723-725, 2010
2942010
Duelling timescales of host movement and disease recovery determine invasion of disease in structured populations
PC Cross, JO Lloyd‐Smith, PLF Johnson, WM Getz
Ecology Letters 8 (6), 587-595, 2005
1802005
Utility of R0 as a predictor of disease invasion in structured populations
PC Cross, PLF Johnson, JO Lloyd-Smith, WM Getz
Journal of the Royal Society Interface 4 (13), 315-324, 2006
952006
Accounting for bias from sequencing error in population genetic estimates
PLF Johnson, M Slatkin
Molecular biology and evolution 25 (1), 199-206, 2007
932007
Inference of population genetic parameters in metagenomics: a clean look at messy data
PLF Johnson, M Slatkin
Genome research 16 (10), 1320-1327, 2006
812006
Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean
H Schroeder, MC Ávila-Arcos, AS Malaspinas, GD Poznik, ...
Proceedings of the National Academy of Sciences 112 (12), 3669-3673, 2015
712015
Peripheral selection rather than thymic involution explains sudden contraction in naive CD4 T-cell diversity with age
PLF Johnson, AJ Yates, JJ Goronzy, R Antia
Proceedings of the National Academy of Sciences 109 (52), 21432-21437, 2012
622012
Initial viral load determines the magnitude of the human CD8 T cell response to yellow fever vaccination
RS Akondy, PLF Johnson, HI Nakaya, S Edupuganti, MJ Mulligan, ...
Proceedings of the National Academy of Sciences 112 (10), 3050-3055, 2015
602015
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Articles 1–20