Domenico Cozzetto
Domenico Cozzetto
Senior Bioinformatician, NIHR Biomedical Research Centre, Guy's and St. Thomas' NHS Foundation Trust
Verified email at kcl.ac.uk
Title
Cited by
Cited by
Year
A large-scale evaluation of computational protein function prediction
P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ...
Nature methods 10 (3), 221-227, 2013
7802013
PSICOV: precise structural contact prediction using sparse inverse covariance estimation on large multiple sequence alignments
DT Jones, DWA Buchan, D Cozzetto, M Pontil
Bioinformatics 28 (2), 184-190, 2012
6732012
DISOPRED3: precise disordered region predictions with annotated protein-binding activity
DT Jones, D Cozzetto
Bioinformatics 31 (6), 857-863, 2015
4982015
The PMDB protein model database
T Castrignano, PDO De Meo, D Cozzetto, IG Talamo, A Tramontano
Nucleic acids research 34 (suppl_1), D306-D309, 2006
3072006
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
2802016
Evaluation of template‐based models in CASP8 with standard measures
D Cozzetto, A Kryshtafovych, K Fidelis, J Moult, B Rost, A Tramontano
Proteins: Structure, Function, and Bioinformatics 77 (S9), 18-28, 2009
1562009
Assessment of predictions in the model quality assessment category
D Cozzetto, A Kryshtafovych, M Ceriani, A Tramontano
Proteins: Structure, Function, and Bioinformatics 69 (S8), 175-183, 2007
1272007
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
952019
Evaluation of predictions in the CASP10 model refinement category
T Nugent, D Cozzetto, DT Jones
Proteins: Structure, Function, and Bioinformatics 82, 98-111, 2014
912014
Protein function prediction by massive integration of evolutionary analyses and multiple data sources
D Cozzetto, DWA Buchan, K Bryson, DT Jones
BMC bioinformatics 14 (3), 1-11, 2013
872013
Evaluation of CASP8 model quality predictions
D Cozzetto, A Kryshtafovych, A Tramontano
Proteins: Structure, Function, and Bioinformatics 77 (S9), 157-166, 2009
782009
Evaluation of CASP8 model quality predictions
D Cozzetto, A Kryshtafovych, A Tramontano
Proteins: Structure, Function, and Bioinformatics 77 (S9), 157-166, 2009
782009
Relationship between multiple sequence alignments and quality of protein comparative models
D Cozzetto, A Tramontano
Proteins: Structure, Function, and Bioinformatics 58 (1), 151-157, 2005
602005
Computer-assisted protein domain boundary prediction using the Dom-Pred server
K Bryson, D Cozzetto, DT Jones
Current Protein and Peptide Science 8 (2), 181-188, 2007
592007
FFPred 3: feature-based function prediction for all Gene Ontology domains
D Cozzetto, F Minneci, H Currant, DT Jones
Scientific reports 6 (1), 1-11, 2016
582016
FFPred 2.0: improved homology-independent prediction of gene ontology terms for eukaryotic protein sequences
F Minneci, D Piovesan, D Cozzetto, DT Jones
PLoS One 8 (5), e63754, 2013
572013
The contribution of intrinsic disorder prediction to the elucidation of protein function
D Cozzetto, DT Jones
Current opinion in structural biology 23 (3), 467-472, 2013
482013
Predicting human protein function with multi-task deep neural networks
R Fa, D Cozzetto, C Wan, DT Jones
PloS one 13 (6), e0198216, 2018
452018
Genome3D: exploiting structure to help users understand their sequences
TE Lewis, I Sillitoe, A Andreeva, TL Blundell, DWA Buchan, C Chothia, ...
Nucleic acids research 43 (D1), D382-D386, 2015
362015
Computational methods for annotation transfers from sequence
D Cozzetto, DT Jones
The Gene Ontology Handbook, 55-67, 2017
312017
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