| Landscape and dynamics of single immune cells in hepatocellular carcinoma Q Zhang, Y He, N Luo, SJ Patel, Y Han, R Gao, M Modak, S Carotta, ... Cell 179 (4), 829-845. e20, 2019 | 878 | 2019 |
| Genomic basis for RNA alterations in cancer PCAWG Transcriptome Core Group Calabrese Claudia 2 Davidson Natalie R. 3 4 5 ... Nature 578 (7793), 129-136, 2020 | 280 | 2020 |
| Direct comparative analyses of 10X genomics chromium and smart-seq2 X Wang, Y He, Q Zhang, X Ren, Z Zhang Genomics, proteomics & bioinformatics 19 (2), 253-266, 2021 | 211 | 2021 |
| Postzygotic single-nucleotide mosaicisms in whole-genome sequences of clinically unremarkable individuals AY Huang, X Xu, AY Ye, Q Wu, L Yan, B Zhao, X Yang, Y He, S Wang, ... Cell research 24 (11), 1311-1327, 2014 | 64 | 2014 |
| High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations Y Zhang, F Chen, NA Fonseca, Y He, M Fujita, H Nakagawa, Z Zhang, ... Nature communications 11 (1), 736, 2020 | 57 | 2020 |
| Genomic mosaicism in the pathogenesis and inheritance of a Rett syndrome cohort Q Zhang, X Yang, J Wang, J Li, Q Wu, Y Wen, Y Zhao, X Zhang, H Yao, ... Genetics in Medicine 21 (6), 1330-1338, 2019 | 34 | 2019 |
| “Bioinformatics: Introduction and methods,” a bilingual massive open online course (MOOC) as a new example for global bioinformatics education Y Ding, M Wang, Y He, AY Ye, X Yang, F Liu, Y Meng, G Gao, L Wei PLoS computational biology 10 (12), e1003955, 2014 | 33 | 2014 |
| Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types C Calabrese, NR Davidson, NA Fonseca, Y He, A Kahles, K Lehmann, ... | 15 | 2017 |
| Pan-cancer study of heterogeneous RNA aberrations NA Fonseca, A Kahles, KV Lehmann, C Calabrese, A Chateigner, ... bioRxiv, 183889, 2017 | 11 | 2017 |
| PCAWG Transcriptome Core Group; PCAWG Transcriptome Working Group; PCAWG Consortium, Genomic basis for RNA alterations in cancer C Calabrese, NR Davidson, D Demircioğlu, NA Fonseca, Y He, A Kahles, ... Nature 578 (7793), 129-136, 2020 | 10 | 2020 |
| Association of a missense nucleotide polymorphism in the MT‐ND2 gene with mitochondrial reactive oxygen species production in the Tibet chicken embryo … XY Wang, Y He, JY Li, HG Bao, C Wu Animal Genetics 44 (4), 472-475, 2013 | 10 | 2013 |
| Whole genome and RNA sequencing of 1,220 cancers reveals hundreds of genes deregulated by rearrangement of cis-regulatory elements Y Zhang, F Chen, NA Fonseca, Y He, M Fujita, H Nakagawa, Z Zhang, ... bioRxiv, 099861, 2017 | 8 | 2017 |
| Comprehensive genome and transcriptome analysis reveals genetic basis for gene fusions in cancer NA Fonseca, Y He, L Greger, PCAWG3, A Brazma, Z Zhang BioRxiv, 148684, 2017 | 3 | 2017 |
| Abstract SY10-02: Pan-cancer study of recurrent and heterogeneous RNA aberrations and association with whole-genome variants S Amin, P Awadalla, A Biankin, P Boutros, A Brazma, AN Brooks, ... Cancer Research 77 (13_Supplement), SY10-02-SY10-02, 2017 | 1 | 2017 |
| Author Correction: Genomic basis for RNA alterations in cancer PCAWG Transcriptome Core Group Calabrese Claudia 2 Davidson Natalie R. 3 4 5 ... Nature 614 (7948), E37-E37, 2023 | | 2023 |
| Genomic basis for RNA alterations in cancer (vol 578, pg 129, 2020) C Calabrese, NR Davidson, D Demircioglu, NA Fonseca, Y He, A Kahles, ... NATURE, 2023 | | 2023 |
| Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations Y Zhang, F Chen, NA Fonseca, Y He, M Fujita, H Nakagawa, Z Zhang, ... nature communications 13 (1), 7572, 2022 | | 2022 |
| Sex differences in oncogenic mutational processes SD Prokopec, RX Sun, F Yousif, N Schmitz, F Al-Shahrour, G Atwal, ... Nature Publishing Group UK, 2020 | | 2020 |
| Integrating diverse transcriptomic alterations to identify cancer-relevant genes NR Davidson, ... Cancer Research 77 (13_Supplement), 389-389, 2017 | | 2017 |
