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Charlotte Rich-Griffin
Charlotte Rich-Griffin
Computational Biologist, WHG, University of Oxford
Verified email at well.ox.ac.uk - Homepage
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Cited by
Year
A blood atlas of COVID-19 defines hallmarks of disease severity and specificity
DJ Ahern, Z Ai, M Ainsworth, C Allan, A Allcock, B Angus, MA Ansari, ...
Cell 185 (5), 916-938. e58, 2022
1752022
Single-cell transcriptomics: a high-resolution avenue for plant functional genomics
C Rich-Griffin, A Stechemesser, J Finch, E Lucas, S Ott, P Schäfer
Trends in plant science 25 (2), 186-197, 2020
1562020
An immunodominant NP105–113-B*07:02 cytotoxic T cell response controls viral replication and is associated with less severe COVID-19 disease
Y Peng, SL Felce, D Dong, F Penkava, AJ Mentzer, X Yao, G Liu, Z Yin, ...
Nature immunology 23 (1), 50-61, 2022
1412022
Regulation of cell type-specific immunity networks in Arabidopsis roots
C Rich-Griffin, R Eichmann, MU Reitz, S Hermann, K Woolley-Allen, ...
Plant Cell 32 (9), 2742-2762, 2020
662020
Constructing custom-made radiotranscriptomic signatures of vascular inflammation from routine CT angiograms: a prospective outcomes validation study in COVID-19
CP Kotanidis, C Xie, D Alexander, JCL Rodrigues, K Burnham, A Mentzer, ...
The Lancet Digital Health 4 (10), e705-e716, 2022
152022
Plant circadian clock control of Medicago truncatula nodulation via regulation of nodule cysteine-rich peptides
M Achom, P Roy, B Lagunas, E Picot, L Richards, R Bonyadi-Pour, ...
Journal of Experimental Botany 73 (7), 2142-2156, 2022
122022
Symbiont-host interactome mapping reveals effector-targeted modulation of hormone networks and activation of growth promotion
R Osborne, L Rehneke, S Lehmann, J Roberts, M Altmann, S Altmann, ...
Nature Communications 14 (1), 4065, 2023
102023
Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots.
C Rich, M Reitz, R Eichmann, S Hermann, DJ Jenkins, KH Kogel, ...
BioRxiv, 302448, 2018
82018
Panpipes: a pipeline for multiomic single-cell data analysis
C Rich-Griffin, F Curion, T Thomas, D Agarwal, FJ Theis, CA Dendrou
bioRxiv, 2023.03. 11.532085, 2023
62023
A longitudinal single-cell therapeutic atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease
T Thomas, C Rich-Griffin, M Pohin, M Friedrich, D Aschenbrenner, ...
bioRxiv, 2023.05. 05.539635, 2023
52023
Photizo: an open-source library for cross-sample analysis of FTIR spectroscopy data
M Grant-Peters, C Rich-Griffin, JE Grant-Peters, G Cinque, CA Dendrou
Bioinformatics 38 (13), 3490-3492, 2022
42022
Cell type identity determines transcriptomic immune responses inArabidopsis thalianaroots
C Rich, MU Reitz, R Eichmann, S Hermann, DJ Jenkins, K Kogel, ...
32018
Epigenetic priming of immune/inflammatory pathways activation and abnormal activity of cell cycle pathway in a perinatal model of white matter injury
AL Schang, J Van Steenwinckel, ZS Ioannidou, J Lipecki, C Rich-Griffin, ...
Cell Death & Disease 13 (12), 1038, 2022
22022
Biochemical and metabolic maladaption defines pathological niches in progressive multiple sclerosis
M Grant-Peters, C Rich-Griffin, HY Yeung, T Thomas, S Davis, M Azizian, ...
bioRxiv, 2022.09. 26.509462, 2022
22022
Panpipes: a pipeline for multiomic single-cell and spatial transcriptomic data analysis
F Curion, C Rich-Griffin, D Agarwal, S Ouologuem, K Rue-Albrecht, L May, ...
Genome Biology 25 (1), 181, 2024
12024
hadge: a comprehensive pipeline for donor deconvolution in single-cell studies
F Curion, X Wu, L Heumos, MMG André, L Halle, M Ozols, M Grant-Peters, ...
Genome Biology 25 (1), 109, 2024
12024
hadge: a comprehensive pipeline for donor deconvolution in single cell
F Curion, X Wu, L Heumos, M Gonzales, L Halle, M Grant-Peters, ...
bioRxiv, 2023.07. 23.550061, 2023
12023
Anti-TNF-induced IL-27 modulates regulatory T cell responses in patients with IBD that respond to therapy
RS Peres, T Thomas, M Friedrich, M Pohin, C Pearson, RC Ferreira, ...
bioRxiv, 2022.11. 21.517257, 2022
12022
The plant circadian clock gene LHY influences Medicago truncatula nodulation
M Achom, P Roy, B Lagunas, R Bonyadi-Pour, AJ Pardal, L Baxter, ...
bioRxiv, 2021.03. 22.435813, 2021
12021
Epigenome and transcriptome landscapes highlight dual roles of proinflammatory players in a perinatal model of white matter injury
AL Schang, J Steenwinckel, J Lipecki, C Rich-Griffin, K Woolley-Allen, ...
bioRxiv, 411702, 2018
12018
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