Federico Giorgi
Federico Giorgi
Assistant Professor of Bioinformatics at University of Bologna, Italy
Verified email at unibo.it - Homepage
TitleCited byYear
Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization
F Licausi, M Kosmacz, DA Weits, B Giuntoli, FM Giorgi, LACJ Voesenek, ...
Nature, 2011
3792011
Co‐expression tools for plant biology: opportunities for hypothesis generation and caveats
B Usadel, T Obayashi, M Mutwil, FM Giorgi, GW Bassel, M Tanimoto, ...
Plant, cell & environment 32 (12), 1633-1651, 2009
3742009
An extensive evaluation of read trimming effects on Illumina NGS data analysis
C Del Fabbro, S Scalabrin, M Morgante, FM Giorgi
PloS one 8 (12), e85024, 2013
2232013
PlaNet: combined sequence and expression comparisons across plant networks derived from seven species
M Mutwil, S Klie, T Tohge, FM Giorgi, O Wilkins, MM Campbell, AR Fernie, ...
The Plant Cell 23 (3), 895-910, 2011
2172011
Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera
F Licausi, FM Giorgi, S Zenoni, F Osti, M Pezzotti, P Perata
BMC genomics 11 (1), 719, 2010
2072010
Functional characterization of somatic mutations in cancer using network-based inference of protein activity
MJ Alvarez, Y Shen, FM Giorgi, A Lachmann, BB Ding, BH Ye, A Califano
Nature genetics 48 (8), 838, 2016
1422016
Search for the decay Bs0→ μ+ μ− with the ATLAS detector
G Aad, B Abbott, J Abdallah, SA Khalek, AA Abdelalim, O Abdinov, B Abi, ...
Physics Letters B 713 (4-5), 387-407, 2012
1232012
Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis
M Lohse, A Nunes-Nesi, P KrŘger, A Nagel, J Hannemann, FM Giorgi, ...
Plant Physiology 153 (2), 642-651, 2010
1212010
Technical design report for the phase-I upgrade of the ATLAS TDAQ system
G Aad, A Kupco, P Laurelli, S Webb, S Sekula, J Huston, K Jakobs, ...
1172013
Comparative study of RNA-seq- and Microarray-derived coexpression networks in Arabidopsis thaliana
FM Giorgi, C Del Fabbro, F Licausi
Bioinformatics 29 (6), 717-724, 2013
892013
Measurements of the production cross section of a Z boson in association with jets in pp collisions at
A Collaboration
Eur. Phys. J. C 77, 361, 2017
87*2017
Trimmomatic: a flexible read trimming tool for illumina NGS data
A Bolger, F Giorgi
URL http://www. usadellab. org/cms/index. php, 2014
802014
Low duplicability and network fragility of cancer genes
D Rambaldi, FM Giorgi, F Capuani, A Ciliberto, FD Ciccarelli
Trends in genetics 24 (9), 427-430, 2008
792008
Structural analysis of the RZZ complex reveals common ancestry with multisubunit vesicle tethering machinery
F ăivril, A Wehenkel, FM Giorgi, S Santaguida, A Di Fonzo, G Grigorean, ...
Structure 18 (5), 616-626, 2010
692010
ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information
A Lachmann, FM Giorgi, G Lopez, A Califano
Bioinformatics 32 (14), 2233-2235, 2016
642016
Algorithm-driven Artifacts in median polish summarization of Microarray data
F Giorgi, A Bolger, M Lohse, B Usadel
BMC bioinformatics 11 (1), 553, 2010
532010
Transcriptional wiring of cell wall-related genes in Arabidopsis
M Mutwil, C Ruprecht, FM Giorgi, M Bringmann, B Usadel, S Persson
Molecular plant 2 (5), 1015-1024, 2009
372009
Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon
R Sibout, S Proost, BO Hansen, N Vaid, FM Giorgi, S Ho‐Yue‐Kuang, ...
New Phytologist 215 (3), 1009-1025, 2017
262017
Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum)
YP Lee, FM Giorgi, M Lohse, K Kvederaviciute, S Klages, B Usadel, ...
BMC genomics 14 (1), 793, 2013
252013
High-definition CpG methylation of novel genes in gastric carcinogenesis identified by next-generation sequencing
JL Sepulveda, JL Gutierrez-Pajares, A Luna, Y Yao, JW Tobias, ...
Modern Pathology 29 (2), 182, 2016
232016
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