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Sandipan Mohanty
Sandipan Mohanty
Scientist, SimLab Biology, Jülich Supercomputing Centre, Institute of Advanced Simulation, Research Centre Jülich, Germany
Verified email at fz-juelich.de - Homepage
Title
Cited by
Cited by
Year
Structural reorganisation and potential toxicity of oligomeric species formed during the assembly of amyloid fibrils
M Cheon, I Chang, S Mohanty, LM Luheshi, CM Dobson, M Vendruscolo, ...
PLoS computational biology 3 (9), e173, 2007
2552007
Oligomerization of amyloid Aβ16–22 peptides using hydrogen bonds and hydrophobicity forces
G Favrin, A Irbäck, S Mohanty
Biophysical Journal 87 (6), 3657-3664, 2004
1632004
PROFASI: a Monte Carlo simulation package for protein folding and aggregation
A Irbäck, S Mohanty
Journal of computational chemistry 27 (13), 1548-1555, 2006
1352006
Formation and growth of oligomers: a Monte Carlo study of an amyloid tau fragment
DW Li, S Mohanty, A Irbäck, S Huo
PLoS computational biology 4 (12), e1000238, 2008
1212008
Folding thermodynamics of peptides
A Irbäck, S Mohanty
Biophysical journal 88 (3), 1560-1569, 2005
1092005
Dissecting the mechanical unfolding of ubiquitin
A Irbäck, S Mitternacht, S Mohanty
Proceedings of the National Academy of Sciences 102 (38), 13427-13432, 2005
852005
An effective all-atom potential for proteins
A Irbäck, S Mitternacht, S Mohanty
PMC biophysics 2, 1-24, 2009
722009
Simulation of Top7-CFr: A transient helix extension guides folding
S Mohanty, JH Meinke, O Zimmermann, UHE Hansmann
Proceedings of the National Academy of Sciences 105 (23), 8004-8007, 2008
492008
Distinct phases of free α‐synuclein—A Monte Carlo study
SÆ Jónsson, S Mohanty, A Irbäck
Proteins: Structure, Function, and Bioinformatics 80 (9), 2169-2177, 2012
412012
SMMP v. 3.0—Simulating proteins and protein interactions in Python and Fortran
JH Meinke, S Mohanty, F Eisenmenger, UHE Hansmann
Computer physics communications 178 (6), 459-470, 2008
382008
The Lund fragmentation process for a multi-gluon string according to the area law
B Andersson, S Mohanty, F Söderberg
The European Physical Journal C-Particles and Fields 21 (4), 631-647, 2001
342001
Recent developments in the Lund model
B Andersson, S Mohanty, F Soderberg
arXiv preprint hep-ph/0212122, 2002
332002
Equilibrium simulation of trp-cage in the presence of protein crowders
A Bille, B Linse, S Mohanty, A Irbäck
The journal of chemical physics 143 (17), 2015
272015
Folding of proteins with diverse folds
S Mohanty, UHE Hansmann
Biophysical journal 91 (10), 3573-3578, 2006
262006
Stability and local unfolding of SOD1 in the presence of protein crowders
A Bille, KS Jensen, S Mohanty, M Akke, A Irback
The Journal of Physical Chemistry B 123 (9), 1920-1930, 2019
212019
Role of prion disease-linked mutations in the intrinsically disordered N-terminal domain of the prion protein
X Cong, N Casiraghi, G Rossetti, S Mohanty, G Giachin, G Legname, ...
Journal of chemical theory and computation 9 (11), 5158-5167, 2013
212013
Folding of Top7 in unbiased all‐atom Monte Carlo simulations
S Mohanty, JH Meinke, O Zimmermann
Proteins: Structure, Function, and Bioinformatics 81 (8), 1446-1456, 2013
192013
Peptide folding in the presence of interacting protein crowders
A Bille, S Mohanty, A Irbäck
The journal of chemical physics 144 (17), 2016
162016
Computational methods to study the structure and dynamics of biomolecules and biomolecular processes
A Irbäck, S Mohanty
Springer Berlin Heidelberg, 2014
162014
Accelerating atomic-level protein simulations by flat-histogram techniques
S Jónsson, S Mohanty, A Irbäck
The Journal of chemical physics 135 (12), 2011
142011
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