| The Invention of Science: A New History of the Scientific Revolution D Wootton Penguin UK, 2015 | 756 | 2015 |
| Bad medicine: doctors doing harm since Hippocrates D Wootton Oxford University Press, USA, 2006 | 495 | 2006 |
| Atheism from the Reformation to the Enlightenment M Hunter, D Wootton Oxford University Press, 1992 | 488* | 1992 |
| Republicanism, liberty, and commercial society, 1649-1776 D Wootton Stanford University Press, 1994 | 462* | 1994 |
| Political writings J Locke, D Wootton Hackett Publishing Company Incorporated, 1993 | 414* | 1993 |
| Divine Right and Democracy: An Anthology of Political Writings in Stuart England D Wootton London: Penguin, 1986 | 404* | 1986 |
| Paolo Sarpi: Between Renaissance and Enlightenment D Wootton Cambridge University Press, 2002 | 237 | 2002 |
| Selected political writings N Machiavelli, D Wootton Hackett Publishing, 1994 | 168* | 1994 |
| Leveller democracy and the Puritan Revolution D Wootton The Cambridge history of political thought, 1450-1700, 1991 | 140 | 1991 |
| Political Writing D Wootton A Companion to Literature from Milton to Blake, 497-507, 2017 | 129 | 2017 |
| David Hume,‘the historian’ D Wootton The Cambridge Companion to Hume, 281-312, 1993 | 122 | 1993 |
| Galileo: Watcher of the skies D Wootton Yale University Press, 2010 | 117 | 2010 |
| Lucien Febvre and the problem of unbelief in the early modern period D Wootton The Journal of Modern History 60 (4), 695-730, 1988 | 101 | 1988 |
| The True Origins of Republicanism: the disciples of Baron and the counter-example of Venturi D Wootton Il repubblicanesimo moderno. L’idea di repubblica nella riflessiione storica …, 2006 | 89 | 2006 |
| Power, Pleasure, and Profit: Insatiable Appetites from Machiavelli to Madison D Wootton Belknap Press, 2018 | 75 | 2018 |
| The Essential Federalist and Anti-Federalist Papers A Hamilton, J Madison, J Jay, D Wootton Hackett Publishing Company, 2003 | 74 | 2003 |
| New histories of atheism D Wootton Atheism from the Reformation to the Enlightenment, 13-54, 1992 | 74 | 1992 |
| Modern political thought: Readings from Machiavelli to Nietzsche D Wootton Hackett Publishing, 1996 | 68 | 1996 |
| John Locke and Richard Ashcraft's Revolutionary Politics D Wootton Political Studies 40 (1), 79-98, 1992 | 61 | 1992 |
| From Rebellion to Revolution: the crisis of the winter of 1642/3 and the origins of civil war radicalism D Wootton The English Historical Review 105 (416), 654-669, 1990 | 59 | 1990 |
