| JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets ME Hughes, JB Hogenesch, K Kornacker Journal of biological rhythms 25 (5), 372-380, 2010 | 1015 | 2010 |
| Gene expression in papillary thyroid carcinoma reveals highly consistent profiles Y Huang, M Prasad, WJ Lemon, H Hampel, FA Wright, K Kornacker, ... Proceedings of the National Academy of Sciences 98 (26), 15044-15049, 2001 | 522 | 2001 |
| Stimulation of the insulin/mTOR pathway delays cone death in a mouse model of retinitis pigmentosa C Punzo, K Kornacker, CL Cepko Nature neuroscience 12 (1), 44-52, 2009 | 517 | 2009 |
| MetaCycle: an integrated R package to evaluate periodicity in large scale data G Wu, RC Anafi, ME Hughes, K Kornacker, JB Hogenesch Bioinformatics 32 (21), 3351-3353, 2016 | 420 | 2016 |
| Excitatory/inhibitory synaptic imbalance leads to hippocampal hyperexcitability in mouse models of tuberous sclerosis HS Bateup, CA Johnson, CL Denefrio, JL Saulnier, K Kornacker, ... Neuron 78 (3), 510-522, 2013 | 352 | 2013 |
| Chipping away at the chip bias: RNA degradation in microarray analysis H Auer, S Lyianarachchi, D Newsom, MI Klisovic, uido Marcucci, ... Nature genetics 35 (4), 292-293, 2003 | 276 | 2003 |
| Synergistic function of E2F7 and E2F8 is essential for cell survival and embryonic development J Li, C Ran, E Li, F Gordon, G Comstock, H Siddiqui, W Cleghorn, ... Developmental cell 14 (1), 62-75, 2008 | 262 | 2008 |
| Guidelines for genome-scale analysis of biological rhythms ME Hughes, KC Abruzzi, R Allada, R Anafi, AB Arpat, G Asher, P Baldi, ... Journal of biological rhythms 32 (5), 380-393, 2017 | 227 | 2017 |
| RNA-Seq and molecular docking reveal multi-level pesticide resistance in the bed bug P Mamidala, AJ Wijeratne, S Wijeratne, K Kornacker, B Sudhamalla, ... BMC genomics 13, 1-17, 2012 | 157 | 2012 |
| HOXB4's road map to stem cell expansion B Schiedlmeier, AC Santos, A Ribeiro, N Moncaut, D Lesinski, H Auer, ... Proceedings of the National Academy of Sciences 104 (43), 16952-16957, 2007 | 121 | 2007 |
| Accurate quantification of DNA methylation using combined bisulfite restriction analysis coupled with the Agilent 2100 Bioanalyzer platform RM Brena, H Auer, K Kornacker, B Hackanson, A Raval, JC Byrd, C Plass Nucleic acids research 34 (3), e17-e17, 2006 | 105 | 2006 |
| Accurate expression profiling of very small cell populations E Gonzalez-Roca, X Garcia-Albéniz, S Rodriguez-Mulero, RR Gomis, ... PloS one 5 (12), e14418, 2010 | 87 | 2010 |
| Expression profiling using Affymetrix GeneChip microarrays H Auer, DL Newsom, K Kornacker Microchip Methods in Diagnostics, 35-46, 2009 | 77 | 2009 |
| Genomic sites hypersensitive to ultraviolet radiation S Premi, L Han, S Mehta, J Knight, D Zhao, MA Palmatier, K Kornacker, ... Proceedings of the National Academy of Sciences 116 (48), 24196-24205, 2019 | 74 | 2019 |
| DNA copy number gains in head and neck squamous cell carcinoma M Lin, LT Smith, DJ Smiraglia, R Kazhiyur-Mannar, JC Lang, DE Schuller, ... Oncogene 25 (9), 1424-1433, 2006 | 65 | 2006 |
| Age-associated disruption of molecular clock expression in skeletal muscle of the spontaneously hypertensive rat M Miyazaki, E Schroder, SE Edelmann, ME Hughes, K Kornacker, ... PloS one 6 (11), e27168, 2011 | 59 | 2011 |
| Quantification of DNA methylation in electrofluidics chips (Bio-COBRA) RM Brena, H Auer, K Kornacker, C Plass Nature protocols 1 (1), 52-58, 2006 | 45 | 2006 |
| Identification of a unique transgenic mouse line that develops megabladder, obstructive uropathy, and renal dysfunction S Singh, M Robinson, F Nahi, B Coley, ML Robinson, CM Bates, ... Journal of the American Society of Nephrology 18 (2), 461-471, 2007 | 37 | 2007 |
| Big results from small samples: evaluation of amplification protocols for gene expression profiling A Viale, J Li, J Tiesman, S Hester, A Massimi, C Griffin, G Grills, G Khitrov, ... Journal of Biomolecular Techniques: JBT 18 (3), 150, 2007 | 30 | 2007 |
| Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays H Auer, DL Newsom, NJ Nowak, KM McHugh, S Singh, CY Yu, Y Yang, ... BMC genomics 8, 1-13, 2007 | 26 | 2007 |
