Lukas M. Weber
Lukas M. Weber
Postdoctoral Fellow, Department of Biostatistics, Johns Hopkins University
Verified email at jhu.edu - Homepage
Title
Cited by
Cited by
Year
High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy
C Krieg, M Nowicka, S Guglietta, S Schindler, FJ Hartmann, LM Weber, ...
Nature medicine 24 (2), 144-153, 2018
4062018
Comparison of clustering methods for high‐dimensional single‐cell flow and mass cytometry data
LM Weber, MD Robinson
Cytometry Part A 89 (12), 1084-1096, 2016
2532016
CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets
M Nowicka, C Krieg, LM Weber, FJ Hartmann, S Guglietta, B Becher, ...
F1000Research 6, 2017
2062017
Maximizing mutagenesis with solubilized CRISPR-Cas9 ribonucleoprotein complexes
A Burger, H Lindsay, A Felker, C Hess, C Anders, E Chiavacci, J Zaugg, ...
Development 143 (11), 2025-2037, 2016
1902016
Statistical methods for detecting differentially methylated loci and regions
MD Robinson, A Kahraman, CW Law, H Lindsay, M Nowicka, LM Weber, ...
Frontiers in genetics 5, 324, 2014
1022014
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering
LM Weber, M Nowicka, C Soneson, MD Robinson
Communications biology 2 (1), 1-11, 2019
712019
High-dimensional single-cell analysis reveals the immune signature of narcolepsy
FJ Hartmann, R Bernard-Valnet, C Quériault, D Mrdjen, LM Weber, E Galli, ...
Journal of Experimental Medicine 213 (12), 2621-2633, 2016
712016
Essential guidelines for computational method benchmarking
LM Weber, W Saelens, R Cannoodt, C Soneson, A Hapfelmeier, ...
Genome biology 20 (1), 1-12, 2019
592019
Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
KR Maynard, L Collado-Torres, LM Weber, C Uytingco, BK Barry, ...
Nature neuroscience 24 (3), 425-436, 2021
522021
Circulating neutrophil subsets in advanced lung cancer patients exhibit unique immune signature and relate to prognosis
ME Shaul, O Eyal, S Guglietta, P Aloni, A Zlotnik, E Forkosh, L Levy, ...
The FASEB Journal 34 (3), 4204-4218, 2020
262020
SpatialExperiment: infrastructure for spatially resolved transcriptomics data in R using Bioconductor
D Righelli, LM Weber, HL Crowell, B Pardo, L Collado-Torres, ...
bioRxiv, 2021
62021
HDCytoData: collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats
LM Weber, C Soneson
F1000Research 8, 2019
62019
A retrospective study of the effectiveness of four different treatments of periodontal disease in equine cheek teeth
K Jackson, LM Weber, M Tennant
Journal of veterinary dentistry 33 (2), 83-89, 2016
32016
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
B Pardo, A Spangler, LM Weber, SC Hicks, AE Jaffe, K Martinowich, ...
bioRxiv, 2021
22021
An updated guide for the perplexed: cytometry in the high-dimensional era
T Liechti, LM Weber, TM Ashhurst, N Stanley, M Prlic, S Van Gassen, ...
Nature Immunology, 1-8, 2021
12021
Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design
LM Weber, AA Hippen, PF Hickey, KC Berrett, J Gertz, JA Doherty, ...
GigaScience 10 (9), giab062, 2021
12021
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing
M Petrillo, M Fabbri, DM Kagkli, M Querci, G Van den Eede, E Alm, ...
F1000Research 10 (80), 80, 2021
12021
miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data
AA Hippen, MM Falco, LM Weber, EP Erkan, K Zhang, JA Doherty, ...
bioRxiv, 2021
12021
VistoSeg: a MATLAB pipeline to process, analyze and visualize high resolution histology images for Visium spatial transcriptomics data
M Tippani, HR Divecha, JL Catallini, LM Weber, A Spangler, AE Jaffe, ...
bioRxiv, 2021
2021
Loss of C3aR induces immune infiltration and inflammatory microbiota in a novel spontaneous model of colon cancer
C Krieg, S Carloni, LM Weber, B Fosso, G Hardiman, E Mileti, S El Aidy, ...
bioRxiv, 2021
2021
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