| Ancient genomes revisit the ancestry of domestic and Przewalski’s horses C Gaunitz, A Fages, K Hanghøj, A Albrechtsen, N Khan, M Schubert, ... Science 360 (6384), 111-114, 2018 | 371 | 2018 |
| Tracking five millennia of horse management with extensive ancient genome time series A Fages, K Hanghøj, N Khan, C Gaunitz, A Seguin-Orlando, M Leonardi, ... Cell 177 (6), 1419-1435. e31, 2019 | 250 | 2019 |
| Comparing the performance of three ancient DNA extraction methods for high‐throughput sequencing C Gamba, K Hanghøj, C Gaunitz, AH Alfarhan, SA Alquraishi, ... Molecular Ecology Resources 16 (2), 459-469, 2016 | 177 | 2016 |
| Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding K Hanghøj, I Moltke, PA Andersen, A Manica, TS Korneliussen Gigascience 8 (5), giz034, 2019 | 113 | 2019 |
| Combining bleach and mild predigestion improves ancient DNA recovery from bones S Boessenkool, K Hanghøj, HM Nistelberger, C Der Sarkissian, ... Molecular ecology resources 17 (4), 742-751, 2017 | 104 | 2017 |
| The evolutionary origin and genetic makeup of domestic horses P Librado, A Fages, C Gaunitz, M Leonardi, S Wagner, N Khan, ... Genetics 204 (2), 423-434, 2016 | 103 | 2016 |
| gargammel: a sequence simulator for ancient DNA G Renaud, K Hanghøj, E Willerslev, L Orlando Bioinformatics 33 (4), 577-579, 2017 | 100 | 2017 |
| Joint estimates of heterozygosity and runs of homozygosity for modern and ancient samples G Renaud, K Hanghøj, TS Korneliussen, E Willerslev, L Orlando Genetics 212 (3), 587-614, 2019 | 63 | 2019 |
| Fast, accurate and automatic ancient nucleosome and methylation maps with epiPALEOMIX K Hanghøj, A Seguin-Orlando, M Schubert, T Madsen, JS Pedersen, ... Molecular Biology and Evolution 33 (12), 3284-3298, 2016 | 50 | 2016 |
| High genetic diversity and low differentiation reflect the ecological versatility of the African leopard P Pečnerová, G Garcia-Erill, X Liu, C Nursyifa, RK Waples, CG Santander, ... Current Biology 31 (9), 1862-1871. e5, 2021 | 46 | 2021 |
| meta BIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high‐throughput sequencing shotgun data G Louvel, C Der Sarkissian, K Hanghøj, L Orlando Molecular ecology resources 16 (6), 1415-1427, 2016 | 45 | 2016 |
| fastNGSadmix: admixture proportions and principal component analysis of a single NGS sample E Jørsboe, K Hanghøj, A Albrechtsen Bioinformatics 33 (19), 3148-3150, 2017 | 30 | 2017 |
| Oral health status in historic population: Macroscopic and metagenomic evidence C Willmann, X Mata, K Hanghoej, L Tonasso, L Tisseyre, C Jeziorski, ... PLoS One 13 (5), e0196482, 2018 | 27 | 2018 |
| Ancient epigenomics K Hanghøj, L Orlando Paleogenomics: genome-scale analysis of ancient DNA, 75-111, 2019 | 26 | 2019 |
| Targeted conservation genetics of the endangered chimpanzee P Frandsen, C Fontsere, SV Nielsen, K Hanghøj, N Castejon-Fernandez, ... Heredity 125 (1), 15-27, 2020 | 22 | 2020 |
| DamMet: ancient methylome mapping accounting for errors, true variants, and post-mortem DNA damage K Hanghøj, G Renaud, A Albrechtsen, L Orlando GigaScience 8 (4), giz025, 2019 | 21 | 2019 |
| Clonal yeast biofilms can reap competitive advantages through cell differentiation without being obligatorily multicellular B Regenberg, KE Hanghøj, KS Andersen, JJ Boomsma Proceedings of the Royal Society B: Biological Sciences 283 (1842), 20161303, 2016 | 19 | 2016 |
| Detecting Selection in Low-Coverage High-Throughput Sequencing Data using Principal Component Analysis J Meisner, A Albrechtsen, K Hanghøj bioRxiv, 2021 | 15 | 2021 |
| NGSremix: a software tool for estimating pairwise relatedness between admixed individuals from next-generation sequencing data AK Nøhr, K Hanghøj, G Garcia-Erill, Z Li, I Moltke, A Albrechtsen G3 11 (8), jkab174, 2021 | 14 | 2021 |
| Loss of sucrase-isomaltase function increases acetate levels and improves metabolic health in Greenlandic cohorts MK Andersen, L Skotte, E Jørsboe, R Polito, FF Stæger, P Aldiss, ... Gastroenterology 162 (4), 1171-1182. e3, 2022 | 13 | 2022 |
