Jaap Kaandorp
Jaap Kaandorp
Unknown affiliation
Verified email at uva.nl
TitleCited byYear
Systems biology: parameter estimation for biochemical models
M Ashyraliyev, Y Fomekong‐Nanfack, JA Kaandorp, JG Blom
The FEBS journal 276 (4), 886-902, 2009
3052009
Fractal modelling: growth and form in biology
JA Kaandorp
Springer Science & Business Media, 2012
1782012
Morphological analysis of growth forms of branching marine sessile organisms along environmental gradients
JA Kaandorp
Marine Biology 134 (2), 295-306, 1999
1711999
The algorithmic beauty of seaweeds, sponges and corals
JA Kaandorp, JE Kübler
Springer Science & Business Media, 2001
1532001
Effect of nutrient diffusion and flow on coral morphology
JA Kaandorp, CP Lowe, D Frenkel, PMA Sloot
Physical Review Letters 77 (11), 2328, 1996
1341996
Promoter sequence determines the relationship between expression level and noise
LB Carey, D Van Dijk, PMA Sloot, JA Kaandorp, E Segal
PLoS biology 11 (4), 2013
1132013
Spatial stochastic modelling of the phosphoenolpyruvate-dependent phosphotransferase (PTS) pathway in Escherichia coli
JV Rodriguez, JA Kaandorp, M Dobrzyński, JG Blom
Bioinformatics 22 (15), 1895-1901, 2006
1012006
Rocky substrate communities of the infralittoral fringe of the Boulonnais coast, NW France: a quantitative survey
JA Kaandorp
Marine Biology 92 (2), 255-265, 1986
911986
Morphogenesis of the branching reef coral Madracis mirabilis
JA Kaandorp, PMA Sloot, RMH Merks, RPM Bak, MJA Vermeij, C Maier
Proceedings of the Royal Society B: Biological Sciences 272 (1559), 127-133, 2005
882005
The Skeletal Proteome of the Coral Acropora millepora: The Evolution of Calcification by Co-Option and Domain Shuffling
P Ramos-Silva, J Kaandorp, L Huisman, B Marie, I Zanella-Cléon, ...
Molecular Biology and Evolution 30 (9), 2099-2112, 2013
852013
Calcium homeostasis and signaling in yeast cells and cardiac myocytes
J Cui, JA Kaandorp, PMA Sloot, CM Lloyd, MV Filatov
FEMS yeast research 9 (8), 1137-1147, 2009
832009
Efficient parameter estimation for spatio-temporal models of pattern formation: case study of Drosophila melanogaster
Y Fomekong-Nanfack, JA Kaandorp, J Blom
Bioinformatics 23 (24), 3356-3363, 2007
812007
Genetic, biological and structural hierarchies during sponge spicule formation: From soft sol–gels to solid 3D silica composite structures
X Wang, HC Schröder, K Wang, JA Kaandorp, WEG Mueller
Soft Matter 8 (37), 9501-9518, 2012
782012
Computational methods for diffusion-influenced biochemical reactions
M Dobrzyński, JV Rodríguez, JA Kaandorp, JG Blom
Bioinformatics 23 (15), 1969-1977, 2007
682007
Models of coral growth: spontaneous branching, compactification and the Laplacian growth assumption
R Merks, A Hoekstra, J Kaandorp, P Sloot
Journal of Theoretical Biology 224 (2), 153-166, 2003
672003
Fractal-related assembly of the axial filament in the demosponge Suberites domuncula: relevance to biomineralization and the formation of biogenic silica
WEG Müller, A Boreiko, U Schloßmacher, X Wang, MN Tahir, W Tremel, ...
Biomaterials 28 (30), 4501-4511, 2007
652007
VLAM-G: A Grid-based virtual laboratory
H Afsarmanesh, RG Belleman, ASZ Belloum, A Benabdelkader, ...
Scientific Programming 10 (2), 173-181, 2002
652002
Regional decline in growth rates of massive Porites corals in Southeast Asia
JTI Tanzil, BE Brown, RP Dunne, JN Lee, JA Kaandorp, PA Todd
Global change biology 19 (10), 3011-3023, 2013
572013
Simulating calcium influx and free calcium concentrations in yeast
J Cui, JA Kaandorp, OO Ositelu, V Beaudry, A Knight, YF Nanfack, ...
Cell calcium 45 (2), 123-132, 2009
562009
Dynamics of skeleton formation in the Lake Baikal sponge Lubomirskia baicalensis. Part I. Biological and biochemical studies
OV Kaluzhnaya, SI Belikov, HC Schröder, M Rothenberger, S Zapf, ...
Naturwissenschaften 92 (3), 128-133, 2005
56*2005
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