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Gary Bader
Gary Bader
Professor of Molecular Genetics and Computer Science, The Donnelly Centre, University of Toronto
Verified email at utoronto.ca - Homepage
Title
Cited by
Cited by
Year
An automated method for finding molecular complexes in large protein interaction networks
GD Bader, CWV Hogue
BMC bioinformatics 4, 1-27, 2003
59662003
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
Y Ho, A Gruhler, A Heilbut, GD Bader, L Moore, SL Adams, A Millar, ...
Nature 415 (6868), 180-183, 2002
45882002
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
D Warde-Farley, SL Donaldson, O Comes, K Zuberi, R Badrawi, P Chao, ...
Nucleic acids research 38 (suppl_2), W214-W220, 2010
41282010
Integration of biological networks and gene expression data using Cytoscape
MS Cline, M Smoot, E Cerami, A Kuchinsky, N Landys, C Workman, ...
Nature protocols 2 (10), 2366-2382, 2007
27492007
Systematic genetic analysis with ordered arrays of yeast deletion mutants
AHY Tong, M Evangelista, AB Parsons, H Xu, GD Bader, N Pagé, ...
Science 294 (5550), 2364-2368, 2001
26192001
Global mapping of the yeast genetic interaction network
AHY Tong, G Lesage, GD Bader, H Ding, H Xu, X Xin, J Young, GF Berriz, ...
science 303 (5659), 808-813, 2004
25422004
The genetic landscape of a cell
M Costanzo, A Baryshnikova, J Bellay, Y Kim, ED Spear, CS Sevier, ...
science 327 (5964), 425-431, 2010
25082010
A draft map of the human proteome
MS Kim, SM Pinto, D Getnet, RS Nirujogi, SS Manda, R Chaerkady, ...
Nature 509 (7502), 575-581, 2014
24662014
Functional impact of global rare copy number variation in autism spectrum disorders
D Pinto, AT Pagnamenta, L Klei, R Anney, D Merico, R Regan, J Conroy, ...
Nature 466 (7304), 368-372, 2010
23242010
Enrichment map: a network-based method for gene-set enrichment visualization and interpretation
D Merico, R Isserlin, O Stueker, A Emili, GD Bader
PloS one 5 (11), e13984, 2010
22012010
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
1785*2020
BIND: the biomolecular interaction network database
GD Bader, D Betel, CWV Hogue
Nucleic acids research 31 (1), 248-250, 2003
15762003
A travel guide to Cytoscape plugins
R Saito, ME Smoot, K Ono, J Ruscheinski, PL Wang, S Lotia, AR Pico, ...
Nature methods 9 (11), 1069-1076, 2012
15042012
Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap
Nature Protocols 14, 482–517, 2019
14922019
Association analysis identifies 65 new breast cancer risk loci
K Michailidou, S Lindström, J Dennis, J Beesley, S Hui, S Kar, A Lemaçon, ...
Nature 551 (7678), 92-94, 2017
13782017
The reactome pathway knowledgebase 2022
M Gillespie, B Jassal, R Stephan, M Milacic, K Rothfels, A Senff-Ribeiro, ...
Nucleic acids research 50 (D1), D687-D692, 2022
12812022
Pathway Commons, a web resource for biological pathway data
EG Cerami, BE Gross, E Demir, I Rodchenkov, Ö Babur, N Anwar, ...
Nucleic acids research 39 (suppl_1), D685-D690, 2010
12792010
Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations
SA MacParland, JC Liu, XZ Ma, BT Innes, AM Bartczak, BK Gage, ...
Nature communications 9 (1), 4383, 2018
11302018
Molecular classification of ependymal tumors across all CNS compartments, histopathological grades, and age groups
KW Pajtler, H Witt, M Sill, DTW Jones, V Hovestadt, F Kratochwil, K Wani, ...
Cancer cell 27 (5), 728-743, 2015
11052015
Bioinformatics
AD Baxevanis, GD Bader, DS Wishart
John Wiley & Sons, 2020
11032020
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