Junjie Zhu
Junjie Zhu
Apple Inc.
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
Massively parallel digital transcriptional profiling of single cells
GXY Zheng, JM Terry, P Belgrader, P Ryvkin, ZW Bent, R Wilson, ...
Nature communications 8 (1), 1-12, 2017
23702017
Organoid modeling of the tumor immune microenvironment
JT Neal, X Li, J Zhu, V Giangarra, CL Grzeskowiak, J Ju, IH Liu, SH Chiou, ...
Cell 175 (7), 1972-1988. e16, 2018
4062018
Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning
B Wang, J Zhu, E Pierson, D Ramazzotti, S Batzoglou
Nature methods 14 (4), 414-416, 2017
3862017
Inflammatory cytokine TNFα promotes the long-term expansion of primary hepatocytes in 3D culture
WC Peng, CY Logan, M Fish, T Anbarchian, F Aguisanda, ...
Cell 175 (6), 1607-1619. e15, 2018
1022018
Assessment of network module identification across complex diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
Nature methods 16 (9), 843-852, 2019
992019
Network Enhancement: a general method to denoise weighted biological networks
B Wang, A Pourshafeie, M Zitnik, J Zhu, CD Bustamante, S Batzoglou, ...
Nature Communications 9 (1), 3108, 2018
642018
Progenitor identification and SARS-CoV-2 infection in human distal lung organoids
AA Salahudeen, SS Choi, A Rustagi, J Zhu, V van Unen, M Sean, ...
Nature 588 (7839), 670-675, 2020
62*2020
SIMLR: A tool for large‐scale genomic analyses by multi‐kernel learning
B Wang, D Ramazzotti, L De Sano, J Zhu, E Pierson, S Batzoglou
Proteomics 18 (2), 1700232, 2018
47*2018
scRNASeqDB: a database for RNA-Seq based gene expression profiles in human single cells
Y Cao, J Zhu, P Jia, Z Zhao
Genes 8 (12), 368, 2017
472017
L (d, 1)-labelings of the ege-path-replacement by factorization of graphs
N Karst, J Oehrlein, DS Troxell, J Zhu
Journal of Combinatorial Optimization 30 (1), 34-41, 2015
102015
Exploratory gene ontology analysis with interactive visualization
J Zhu, Q Zhao, E Katsevich, C Sabatti
Scientific reports 9 (1), 1-9, 2019
82019
Selection-adjusted inference: an application to confidence intervals for cis-eQTL effect sizes
S Panigrahi, J Zhu, C Sabatti
Biostatistics, 2018
62018
The minimum span of L (2, 1)-labelings of generalized flowers
N Karst, J Oehrlein, DS Troxell, J Zhu
Discrete Applied Mathematics 181, 139-151, 2015
52015
On the L (2, 1)-labelings of amalgamations of graphs
SS Adams, N Howell, N Karst, DS Troxell, J Zhu
Discrete Applied Mathematics 161 (7-8), 881-888, 2013
52013
Performance of multi-antenna MMSE receivers in non-homogenous Poisson networks
J Zhu, S Govindasamy
2012 IEEE International Conference on Communications (ICC), 2404-2409, 2012
52012
Labeling amalgamations of Cartesian products of complete graphs with a condition at distance two
N Karst, J Oehrlein, DS Troxell, J Zhu
Discrete Applied Mathematics 178, 101-108, 2014
32014
Unsupervised learning from noisy networks with applications to Hi-C data
B Wang, J Zhu, A Pourshafeie, O Ursu, S Batzoglou, A Kundaje
Advances in Neural Information Processing Systems 29, 3305-3313, 2016
22016
Performance of Multiantenna linear MMSE receivers in doubly stochastic networks
J Zhu, S Govindasamy, J Hwang
IEEE Transactions on Communications 62 (8), 2825-2839, 2014
22014
Integrative Spatial Single-cell Analysis with Graph-based Feature Learning
J Zhu, C Sabatti
bioRxiv, 2020
12020
On the impact of unsynchronized interferers on multi-antenna OFDM systems
J Zhu, RHY Louie, MR McKay, S Govindasamy
2014 IEEE International Conference on Communications (ICC), 2203-2208, 2014
12014
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Articles 1–20