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Inna Shcherbakova
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High-throughput single-nucleotide structural mapping by capillary automated footprinting analysis
S Mitra, IV Shcherbakova, RB Altman, M Brenowitz, A Laederach
Nucleic acids research 36 (11), e63-e63, 2008
1232008
Fast Fenton footprinting: a laboratory-based method for the time-resolved analysis of DNA, RNA and proteins
I Shcherbakova, S Mitra, RH Beer, M Brenowitz
Nucleic acids research 34 (6), e48-e48, 2006
1192006
Alternative spliceosome assembly pathways revealed by single-molecule fluorescence microscopy
I Shcherbakova, AA Hoskins, LJ Friedman, V Serebrov, IR Corrêa, MQ Xu, ...
Cell reports 5 (1), 151-165, 2013
932013
Distinct contribution of electrostatics, initial conformational ensemble, and macromolecular stability in RNA folding
A Laederach, I Shcherbakova, MA Jonikas, RB Altman, M Brenowitz
Proceedings of the National Academy of Sciences 104 (17), 7045-7050, 2007
782007
Concordant exploration of the kinetics of RNA folding from global and local perspectives
LW Kwok, I Shcherbakova, JS Lamb, HY Park, K Andresen, H Smith, ...
Journal of molecular biology 355 (2), 282-293, 2006
772006
Energy barriers, pathways, and dynamics during folding of large, multidomain RNAs
I Shcherbakova, S Mitra, A Laederach, M Brenowitz
Current opinion in chemical biology 12 (6), 655-666, 2008
722008
Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme
I Shcherbakova, S Gupta, MR Chance, M Brenowitz
Journal of molecular biology 342 (5), 1431-1442, 2004
632004
Local kinetic measures of macromolecular structure reveal partitioning among multiple parallel pathways from the earliest steps in the folding of a large RNA molecule
A Laederach, I Shcherbakova, MP Liang, M Brenowitz, RB Altman
Journal of molecular biology 358 (4), 1179-1190, 2006
562006
Monitoring structural changes in nucleic acids with single residue spatial and millisecond time resolution by quantitative hydroxyl radical footprinting
I Shcherbakova, M Brenowitz
Nature protocols 3 (2), 288-302, 2008
372008
Perturbation of the hierarchical folding of a large RNA by the destabilization of its scaffold's tertiary structure
I Shcherbakova, M Brenowitz
Journal of molecular biology 354 (2), 483-496, 2005
292005
Function and structural organization of Mot1 bound to a natural target promoter
RO Sprouse, I Shcherbakova, H Cheng, E Jamison, M Brenowitz, ...
Journal of biological chemistry 283 (36), 24935-24948, 2008
202008
Hydroxyl-radical footprinting to probe equilibrium changes in RNA tertiary structure
I Shcherbakova, S Mitra
Methods in enzymology 468, 31-46, 2009
192009
Following molecular transitions with single residue spatial and millisecond time resolution
I Shcherbakova, S Mitra, RH Beer, M Brenowitz
Methods in cell biology 84, 589-615, 2008
162008
Laser beam space scanning in flow particle counter-analyzers
VA Dubrovskij, KN Dvoretskij, AE Balaev, IV Shcherbakova
Приборы и техника эксперимента 42 (2), 245-248, 1999
51999
Rapid quantification and analysis of kinetic• OH radical footprinting data using SAFA
K Simmons, JS Martin, I Shcherbakova, A Laederach
Methods in enzymology 468, 47-66, 2009
42009
Structural studies of the 30S subunit of ribosomes Thermus thermophilus by small-angle neutron and X-ray scattering
L Fan, DI Svergun, VV Volkov, VL Aksenov, CC Algalarov, OM Selivanova, ...
Journal of applied crystallography 33 (3), 515-518, 2000
12000
Biosynthetic deuteration of Thermus thermophilus ribosomes for SANS
IV Shcherbakova, IN Serdyuk
Journal of applied crystallography 33 (3), 552-555, 2000
12000
Determination of deuterium incorporation into RNA and protein components of the Escherichia coli ribosome at biosynthetic deuteration by small-angle neutron scattering
L Fan, EI Zgurskaya, I Shcherbakova, IN Serdyuk
Journal of applied crystallography 30 (1), 59-64, 1997
11997
Into the CoSMoS: Single Molecule Analysis of Spliceosome Assembly and Activation
AA Hoskins, LJ Friedman, DJ Crawford, EJ Anderson, I Shcherbakova, ...
Biophysical journal 102 (3), 610a, 2012
2012
Into the CoSMoS: Ordered and Dynamic Assembly of Single Spliceosomes
MJ Moore, AA Hoskins, LJ Friedman, DJ Crawford, EJ Anderson, ...
The FASEB Journal 25, 308.1-308.1, 2011
2011
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Articles 1–20