High-throughput single-nucleotide structural mapping by capillary automated footprinting analysis S Mitra, IV Shcherbakova, RB Altman, M Brenowitz, A Laederach Nucleic acids research 36 (11), e63-e63, 2008 | 123 | 2008 |
Fast Fenton footprinting: a laboratory-based method for the time-resolved analysis of DNA, RNA and proteins I Shcherbakova, S Mitra, RH Beer, M Brenowitz Nucleic acids research 34 (6), e48-e48, 2006 | 119 | 2006 |
Alternative spliceosome assembly pathways revealed by single-molecule fluorescence microscopy I Shcherbakova, AA Hoskins, LJ Friedman, V Serebrov, IR Corrêa, MQ Xu, ... Cell reports 5 (1), 151-165, 2013 | 93 | 2013 |
Distinct contribution of electrostatics, initial conformational ensemble, and macromolecular stability in RNA folding A Laederach, I Shcherbakova, MA Jonikas, RB Altman, M Brenowitz Proceedings of the National Academy of Sciences 104 (17), 7045-7050, 2007 | 78 | 2007 |
Concordant exploration of the kinetics of RNA folding from global and local perspectives LW Kwok, I Shcherbakova, JS Lamb, HY Park, K Andresen, H Smith, ... Journal of molecular biology 355 (2), 282-293, 2006 | 77 | 2006 |
Energy barriers, pathways, and dynamics during folding of large, multidomain RNAs I Shcherbakova, S Mitra, A Laederach, M Brenowitz Current opinion in chemical biology 12 (6), 655-666, 2008 | 72 | 2008 |
Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme I Shcherbakova, S Gupta, MR Chance, M Brenowitz Journal of molecular biology 342 (5), 1431-1442, 2004 | 63 | 2004 |
Local kinetic measures of macromolecular structure reveal partitioning among multiple parallel pathways from the earliest steps in the folding of a large RNA molecule A Laederach, I Shcherbakova, MP Liang, M Brenowitz, RB Altman Journal of molecular biology 358 (4), 1179-1190, 2006 | 56 | 2006 |
Monitoring structural changes in nucleic acids with single residue spatial and millisecond time resolution by quantitative hydroxyl radical footprinting I Shcherbakova, M Brenowitz Nature protocols 3 (2), 288-302, 2008 | 37 | 2008 |
Perturbation of the hierarchical folding of a large RNA by the destabilization of its scaffold's tertiary structure I Shcherbakova, M Brenowitz Journal of molecular biology 354 (2), 483-496, 2005 | 29 | 2005 |
Function and structural organization of Mot1 bound to a natural target promoter RO Sprouse, I Shcherbakova, H Cheng, E Jamison, M Brenowitz, ... Journal of biological chemistry 283 (36), 24935-24948, 2008 | 20 | 2008 |
Hydroxyl-radical footprinting to probe equilibrium changes in RNA tertiary structure I Shcherbakova, S Mitra Methods in enzymology 468, 31-46, 2009 | 19 | 2009 |
Following molecular transitions with single residue spatial and millisecond time resolution I Shcherbakova, S Mitra, RH Beer, M Brenowitz Methods in cell biology 84, 589-615, 2008 | 16 | 2008 |
Laser beam space scanning in flow particle counter-analyzers VA Dubrovskij, KN Dvoretskij, AE Balaev, IV Shcherbakova Приборы и техника эксперимента 42 (2), 245-248, 1999 | 5 | 1999 |
Rapid quantification and analysis of kinetic• OH radical footprinting data using SAFA K Simmons, JS Martin, I Shcherbakova, A Laederach Methods in enzymology 468, 47-66, 2009 | 4 | 2009 |
Structural studies of the 30S subunit of ribosomes Thermus thermophilus by small-angle neutron and X-ray scattering L Fan, DI Svergun, VV Volkov, VL Aksenov, CC Algalarov, OM Selivanova, ... Journal of applied crystallography 33 (3), 515-518, 2000 | 1 | 2000 |
Biosynthetic deuteration of Thermus thermophilus ribosomes for SANS IV Shcherbakova, IN Serdyuk Journal of applied crystallography 33 (3), 552-555, 2000 | 1 | 2000 |
Determination of deuterium incorporation into RNA and protein components of the Escherichia coli ribosome at biosynthetic deuteration by small-angle neutron scattering L Fan, EI Zgurskaya, I Shcherbakova, IN Serdyuk Journal of applied crystallography 30 (1), 59-64, 1997 | 1 | 1997 |
Into the CoSMoS: Single Molecule Analysis of Spliceosome Assembly and Activation AA Hoskins, LJ Friedman, DJ Crawford, EJ Anderson, I Shcherbakova, ... Biophysical journal 102 (3), 610a, 2012 | | 2012 |
Into the CoSMoS: Ordered and Dynamic Assembly of Single Spliceosomes MJ Moore, AA Hoskins, LJ Friedman, DJ Crawford, EJ Anderson, ... The FASEB Journal 25, 308.1-308.1, 2011 | | 2011 |