Andrea Schafferhans

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Burkhard RostProfessor of Computer ScienceVerified email at tum.de
Seán O'DonoghueGarvan Institute of Medical Research, AustraliaVerified email at odonoghuelab.org
Christian StolteCellarity, Inc.Verified email at cellarity.com
Tatyana GoldbergAllianzVerified email at rostlab.org
Julian HeinrichBayerVerified email at bayer.com
Guy YachdavColumbia UniversityVerified email at rostlab.org
Vriend GDirector BIPS Mindoro PhilippinesVerified email at radboudumc.nl
Reinhard SchneiderProf. Bioinformatics, University of Luxembourg, Head of Bioinformatics Core Facility, LuxembourgVerified email at uni.lu
Yana BrombergEmory University, Departments of Biology and Computer ScienceVerified email at emory.edu
Peter HönigschmidDepartment of Genome-Oriented Bioinformatics, TUM, WeihenstephanVerified email at wzw.tum.de
Chris SanderHarvard Medical School, Broad Institute, Dana-Farber Cancer Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Lothar RichterTU MünchenVerified email at in.tum.de
Maximilian HechtAmazon.com Inc.Verified email at rostlab.org
Nir Ben-TalProfessor of Biochemistry and Molecular Biology, The George S. Wise Faculty of Life Sciences, TelVerified email at ashtoret.tau.ac.il
Marco PuntaSan Raffaele Hospital, Center for Omics Sciences, Milan, ItalyVerified email at hsr.it
Avner SchlessingerProfessor, Icahn School of Medicine at Mount Sinai, New York, NYVerified email at mssm.edu
Gerhard KlebeProfessor für Pharmazeutische Chemie, Philipps-UniversitätVerified email at mailer.uni-marburg.de
Roman A LaskowskiEuropean Bioinformatics Institute (EBI)Verified email at ebi.ac.uk
Arthur OlsonProfesssor The Scripps Research InstituteVerified email at scripps.edu
David S. GoodsellThe Scripps Research InstituteVerified email at scripps.edu

Andrea Schafferhans

Lecturer at Hochschule Weihenstephan Triesdorf and Postdoc in Bioinformatics at TUM

Verified email at rostlab.org - Homepage

Bioinformatics Computational Biology Structural Biology Pharmaceutical Chemistry Drug Design


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PredictProtein—an open resource for online prediction of protein structural and functional features G Yachdav, E Kloppmann, L Kajan, M Hecht, T Goldberg, T Hamp, ... Nucleic acids research 42 (W1), W337-W343, 2014	699	2014
PredictProtein-predicting protein structure and function for 29 years M Bernhofer, C Dallago, T Karl, V Satagopam, M Heinzinger, M Littmann, ... Nucleic acids research 49 (W1), W535-W540, 2021	201	2021
Visualization of macromolecular structures SI O'donoghue, DS Goodsell, AS Frangakis, F Jossinet, RA Laskowski, ... Nature methods 7 (3), S42-S55, 2010	198	2010
Unexpected features of the dark proteome N Perdigão, J Heinrich, C Stolte, KS Sabir, MJ Buckley, B Tabor, B Signal, ... Proceedings of the National Academy of Sciences 112 (52), 15898-15903, 2015	195	2015
Tools and data services registry: a community effort to document bioinformatics resources J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ... Nucleic acids research 44 (D1), D38-D47, 2016	181	2016
Docking ligands onto binding site representations derived from proteins built by homology modelling A Schafferhans, G Klebe Journal of molecular biology 307 (1), 407-427, 2001	135	2001
Aquaria: simplifying discovery and insight from protein structures SI O'donoghue, KS Sabir, M Kalemanov, C Stolte, B Wellmann, V Ho, ... Nature methods 12 (2), 98-99, 2015	72	2015
Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC) K Neuhaus, R Landstorfer, L Fellner, S Simon, A Schafferhans, ... BMC genomics 17, 1-16, 2016	37	2016
Discovery of numerous novel small genes in the intergenic regions of the Escherichia coli O157:H7 Sakai genome SM Hücker, Z Ardern, T Goldberg, A Schafferhans, M Bernhofer, ... PloS one 12 (9), e0184119, 2017	31	2017
SARS‐CoV‐2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ... Molecular systems biology 17 (9), e10079, 2021	29	2021
The SRS 3D module: integrating structures, sequences and features SI O'Donoghue, JEW Meyer, A Schafferhans, K Fries Bioinformatics 20 (15), 2476-2478, 2004	26	2004
The PSSH database of alignments between protein sequences and tertiary structures A Schafferhans, JEW Meyer, SI O'Donoghue Nucleic Acids Research 31 (1), 494-498, 2003	21	2003
Integrated visual analysis of protein structures, sequences, and feature data C Stolte, KS Sabir, J Heinrich, CJ Hammang, A Schafferhans, ... BMC bioinformatics 16, 1-13, 2015	12	2015
Peptide/benzodiazepine hybrids as ligands of CCK_A and CCK_B receptors A Escherich, J Lutz, C Escrieut, D Fourmy, AS van Neuren, G Müller, ... Biopolymers: Original Research on Biomolecules 56 (2), 55-76, 2000	11	2000
Method for organizing and depicting biological elements S O'donoghue, K Fries, J Meyer, A Schafferhans US Patent App. 10/250,571, 2004	9	2004
SARS-CoV-2 structural coverage map reveals state changes that disrupt host immunity SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ...	8	2020
Dark proteins important for cellular function A Schafferhans, SI O'Donoghue, M Heinzinger, B Rost Proteomics 18 (21-22), 1800227, 2018	7	2018
Systematic modeling of SARS-CoV-2 protein structures SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, B Ho, ... bioRxiv, 2020.07. 16.207308, 2020	3	2020
PSSH2-database of protein sequence-to-structure homologies A Schafferhans, S O’Donoghue Zenodo. https://doi. org/10.5281/ZENODO 4279164, 2020	3	2020
Biological Data Visualization (Dagstuhl Seminar 12372) C Görg, L Hunter, J Kennedy, S O'Donoghue, JJ Van Wijk Dagstuhl Reports 2 (9), 2013	3	2013

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