| PyBoolNet: a python package for the generation, analysis and visualization of boolean networks H Klarner, A Streck, H Siebert Bioinformatics 33 (5), 770-772, 2017 | 114 | 2017 |
| Computing maximal and minimal trap spaces of Boolean networks H Klarner, A Bockmayr, H Siebert Natural Computing 14, 535-544, 2015 | 74 | 2015 |
| Temporal constraints in the logical analysis of regulatory networks H Siebert, A Bockmayr Theoretical Computer Science 391 (3), 258-275, 2008 | 61 | 2008 |
| Incorporating time delays into the logical analysis of gene regulatory networks H Siebert, A Bockmayr Computational Methods in Systems Biology: International Conference, CMSB …, 2006 | 54 | 2006 |
| Parameter identification and model ranking of thomas networks H Klarner, A Streck, D Šafránek, J Kolčák, H Siebert International Conference on Computational Methods in Systems Biology, 207-226, 2012 | 40 | 2012 |
| Approximating attractors of Boolean networks by iterative CTL model checking H Klarner, H Siebert Frontiers in bioengineering and biotechnology 3, 130, 2015 | 33 | 2015 |
| Computing symbolic steady states of boolean networks H Klarner, A Bockmayr, H Siebert Cellular Automata: 11th International Conference on Cellular Automata for …, 2014 | 32 | 2014 |
| Unraveling the regulation of mTORC2 using logical modeling K Thobe, C Sers, H Siebert Cell Communication and Signaling 15, 1-15, 2017 | 24 | 2017 |
| Analysis of discrete bioregulatory networks using symbolic steady states H Siebert Bulletin of mathematical biology 73, 873-898, 2011 | 23 | 2011 |
| Control strategy identification via trap spaces in Boolean networks L Cifuentes Fontanals, E Tonello, H Siebert Computational Methods in Systems Biology: 18th International Conference …, 2020 | 22 | 2020 |
| Time series dependent analysis of unparametrized Thomas networks H Klarner, H Siebert, A Bockmayr IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (5 …, 2012 | 21 | 2012 |
| Basins of attraction, commitment sets, and phenotypes of Boolean networks H Klarner, F Heinitz, S Nee, H Siebert IEEE/ACM transactions on computational biology and bioinformatics 17 (4 …, 2018 | 20 | 2018 |
| Dynamical and structural modularity of discrete regulatory networks H Siebert arXiv preprint arXiv:0910.1412, 2009 | 20 | 2009 |
| Control in Boolean networks with model checking L Cifuentes-Fontanals, E Tonello, H Siebert Frontiers in Applied Mathematics and Statistics 8, 838546, 2022 | 19 | 2022 |
| Fixpunkte und normale Familien quasiregulärer Abbildungen H Siebert CAU Kiel, 2004 | 18 | 2004 |
| Deriving behavior of boolean bioregulatory networks from subnetwork dynamics H Siebert Mathematics in Computer Science 2, 421-442, 2009 | 16 | 2009 |
| Fixed points and normal families of quasiregular mappings H SIebert Journal d'Analyse Mathématique, 2006 | 16 | 2006 |
| Logical-continuous modelling of post-translationally regulated bistability of curli fiber expression in Escherichia coli KP Yousef, A Streck, C Schütte, H Siebert, R Hengge, M Kleist BMC systems biology 9, 1-17, 2015 | 15 | 2015 |
| Identifying lncRNA-mediated regulatory modules via ChIA-PET network analysis D Thiel, ND Conrad, E Ntini, RX Peschutter, H Siebert, A Marsico BMC bioinformatics 20, 1-16, 2019 | 13 | 2019 |
| Complementing ODE-based system analysis using Boolean networks derived from an Euler-like transformation C Stötzel, S Röblitz, H Siebert PloS one 10 (10), e0140954, 2015 | 13 | 2015 |
