Brett Trost
Brett Trost
Research Associate at The Centre for Applied Genomics, Hospital for Sick Children
Verified email at sickkids.ca
Title
Cited by
Cited by
Year
Computational prediction of eukaryotic phosphorylation sites
B Trost, A Kusalik
Bioinformatics 27 (21), 2927-2935, 2011
1452011
A comprehensive workflow for read depth-based identification of copy-number variation from whole-genome sequence data
B Trost, S Walker, Z Wang, B Thiruvahindrapuram, JR MacDonald, ...
The American Journal of Human Genetics 102 (1), 142-155, 2018
1032018
Peptidology: short amino acid modules in cell biology and immunology
G Lucchese, A Stufano, B Trost, A Kusalik, D Kanduc
Amino Acids 33 (4), 703-707, 2007
912007
Strength in numbers: achieving greater accuracy in MHC-I binding prediction by combining the results from multiple prediction tools
B Trost, M Bickis, A Kusalik
Immunome research 3 (1), 1-10, 2007
782007
Length of uninterrupted CAG, independent of polyglutamine size, results in increased somatic instability, hastening onset of Huntington disease
GEB Wright, JA Collins, C Kay, C McDonald, E Dolzhenko, Q Xia, ...
The American Journal of Human Genetics 104 (6), 1116-1126, 2019
652019
PIIKA 2: an expanded, web-based platform for analysis of kinome microarray data
B Trost, J Kindrachuk, P Määttänen, S Napper, A Kusalik
PloS one 8 (11), e80837, 2013
612013
A systematic approach for analysis of peptide array kinome data
Y Li, RJ Arsenault, B Trost, J Slind, PJ Griebel, S Napper, A Kusalik
Science signaling 5 (220), pl2-pl2, 2012
612012
No human protein is exempt from bacterial motifs, not even one
B Trost, G Lucchese, A Stufano, M Bickis, A Kusalik, D Kanduc
Self/nonself 1 (4), 328-334, 2010
602010
Ebola virus modulates transforming growth factor β signaling and cellular markers of mesenchyme-like transition in hepatocytes
J Kindrachuk, V Wahl-Jensen, D Safronetz, B Trost, T Hoenen, ...
Journal of virology 88 (17), 9877-9892, 2014
522014
Computational phosphorylation site prediction in plants using random forests and organism-specific instance weights
B Trost, A Kusalik
Bioinformatics 29 (6), 686-694, 2013
482013
The Personal Genome Project Canada: findings from whole genome sequences of the inaugural 56 participants
MS Reuter, S Walker, B Thiruvahindrapuram, J Whitney, I Cohn, ...
Cmaj 190 (5), E126-E136, 2018
452018
Genome-wide detection of tandem DNA repeats that are expanded in autism
B Trost, W Engchuan, CM Nguyen, B Thiruvahindrapuram, E Dolzhenko, ...
Nature 586 (7827), 80-86, 2020
442020
A large data resource of genomic copy number variation across neurodevelopmental disorders
M Zarrei, CL Burton, W Engchuan, EJ Young, EJ Higginbotham, ...
NPJ genomic medicine 4 (1), 1-13, 2019
432019
Transcriptome analysis of response to Plasmodiophora brassicae infection in the Arabidopsis shoot and root
S Irani, B Trost, M Waldner, N Nayidu, J Tu, AJ Kusalik, CD Todd, Y Wei, ...
BMC genomics 19 (1), 1-19, 2018
432018
DAPPLE: a pipeline for the homology-based prediction of phosphorylation sites
B Trost, R Arsenault, P Griebel, S Napper, A Kusalik
Bioinformatics 29 (13), 1693-1695, 2013
412013
A better sequence-read simulator program for metagenomics
S Johnson, B Trost, JR Long, V Pittet, A Kusalik
BMC bioinformatics 15 (9), 1-10, 2014
382014
Complete Genome Sequence of the Beer Spoilage Organism Pediococcus claussenii ATCC BAA-344T
V Pittet, T Abegunde, T Marfleet, M Haakensen, K Morrow, T Jayaprakash, ...
Journal of bacteriology 194 (5), 1271-1272, 2012
382012
Divergent immune responses to Mycobacterium avium subsp. paratuberculosis infection correlate with kinome responses at the site of intestinal infection
P Määttänen, B Trost, E Scruten, A Potter, A Kusalik, P Griebel, S Napper
Infection and immunity 81 (8), 2861-2872, 2013
342013
Systems kinomics demonstrates Congo Basin monkeypox virus infection selectively modulates host cell signaling responses as compared to West African monkeypox virus
J Kindrachuk, R Arsenault, A Kusalik, KN Kindrachuk, B Trost, S Napper, ...
Molecular & Cellular Proteomics 11 (6), 2012
322012
Glutaminase Deficiency Caused by Short Tandem Repeat Expansion in GLS
ABP van Kuilenburg, M Tarailo-Graovac, PA Richmond, BI Drögemöller, ...
New England Journal of Medicine 380 (15), 1433-1441, 2019
302019
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