Matthew M. Hindle
Matthew M. Hindle
Postdoctoral Researcher, University of Edinburgh
Verified email at ed.ac.uk
TitleCited byYear
New perspectives on glutamine synthetase in grasses
SM Swarbreck, M Defoin-Platel, M Hindle, M Saqi, DZ Habash
Journal of Experimental Botany 62 (4), 1511-1522, 2010
572010
Classifying chemical mode of action using gene networks and machine learning: a case study with the herbicide linuron
A Ornostay, AM Cowie, M Hindle, CJO Baker, CJ Martyniuk
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 8 (4 …, 2013
292013
Data integration for plant genomics—exemplars from the integration of Arabidopsis thaliana databases
A Lysenko, MM Hindle, J Taubert, M Saqi, CJ Rawlings
Briefings in bioinformatics 10 (6), 676-693, 2009
282009
Functional analysis of casein kinase 1 in a minimal circadian system
G van Ooijen, M Hindle, SF Martin, M Barrios-Llerena, F Sanchez, ...
PLoS One 8 (7), e70021, 2013
262013
Systems responses to progressive water stress in durum wheat
DZ Habash, M Baudo, M Hindle, SJ Powers, M Defoin-Platel, R Mitchell, ...
PLoS One 9 (9), e108431, 2014
222014
The OXL format for the exchange of integrated datasets
J Taubert, KP Sieren, M Hindle, B Hoekman, R Winnenburg, S Philippi, ...
Journal of Integrative Bioinformatics 4 (3), 27-40, 2007
192007
Developing integrated crop knowledge networks to advance candidate gene discovery
K Hassani-Pak, M Castellote, M Esch, M Hindle, A Lysenko, J Taubert, ...
Applied & translational genomics 11, 18-26, 2016
182016
The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species
MM Hindle, SF Martin, ZB Noordally, G van Ooijen, ME Barrios-Llerena, ...
BMC genomics 15 (1), 640, 2014
132014
Label‐free quantitative analysis of the casein kinase 2‐responsive phosphoproteome of the marine minimal model species Ostreococcus tauri
T Le Bihan, M Hindle, SF Martin, ME Barrios‐Llerena, J Krahmer, K Kis, ...
Proteomics 15 (23-24), 4135-4144, 2015
122015
Graph-based sequence annotation using a data integration approach
R Pesch, A Lysenko, M Hindle, K Hassani-Pak, R Thiele, C Rawlings, ...
Journal of integrative bioinformatics 5 (2), 58-72, 2008
112008
Functional analysis of the rodent CK1 tau mutation in the circadian clock of a marine unicellular alga
G van Ooijen, SF Martin, ME Barrios-Llerena, M Hindle, T Le Bihan, ...
BMC cell biology 14 (1), 46, 2013
82013
Benchmarking infrastructure for mutation text mining
A Klein, A Riazanov, MM Hindle, CJO Baker
Journal of biomedical semantics 5 (1), 11, 2014
72014
Ecotoxicology Data Federation with SADI Semantic Web Services.
A Riazanov, MM Hindle, ES Goudreau, C Martyniuk, CJO Baker
SWAT4LS, 2012
62012
AIGO: Towards a unified framework for the Analysis and the Inter-comparison of GO functional annotations
M Defoin-Platel, MM Hindle, A Lysenko, SJ Powers, DZ Habash, ...
BMC bioinformatics 12 (1), 431, 2011
62011
Linking life sciences data using graph-based mapping
J Taubert, M Hindle, A Lysenko, J Weile, J Köhler, CJ Rawlings
International Workshop on Data Integration in the Life Sciences, 16-30, 2009
62009
Sample preparation for phosphoproteomic analysis of circadian time series in Arabidopsis thaliana
J Krahmer, MM Hindle, SF Martin, T Le Bihan, AJ Millar
Methods in enzymology 551, 405-431, 2015
52015
Leveraging SADI Semantic Web Services to Exploit Fish Ecotoxicology Data.
MM Hindle, A Riazanov, ES Goudreau, CJ Martyniuk, CJO Baker
CSWS, 19-33, 2011
32011
The quail as an avian model system: its genome provides insights into social behaviour, seasonal biology and infectious disease response
KM Morris, MM Hindle, S Boitard, DW Burt, AF Danner, L Eory, HL Forrest, ...
bioRxiv, 575332, 2019
12019
Circadian protein regulation in the green lineage I. A phospho-dawn anticipates light onset before proteins peak in daytime.
ZB Noordally, MM Hindle, SF Martin, DD Seaton, I Simpson, T Le Bihan, ...
BioRxiv, 287862, 2018
12018
qpMerge: Merging different peptide isoforms using a motif centric strategy
MM Hindle, T Le Bihan, J Krahmer, SF Martin, ZB Noordally, TI Simpson, ...
bioRxiv, 047100, 2016
12016
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Articles 1–20