Dan Nettleton
Dan Nettleton
Distinguished Professor of Statistics, Iowa State University
Verified email at iastate.edu - Homepage
TitleCited byYear
The B73 maize genome: complexity, diversity, and dynamics
PS Schnable, D Ware, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, ...
science 326 (5956), 1112-1115, 2009
30382009
Agrobacterium tumefaciens-mediated transformation of maize embryos using a standard binary vector system
BR Frame, H Shou, RK Chikwamba, Z Zhang, C Xiang, TM Fonger, ...
Plant physiology 129 (1), 13-22, 2002
5012002
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content
NM Springer, K Ying, Y Fu, T Ji, CT Yeh, Y Jia, W Wu, T Richmond, ...
PLoS genetics 5 (11), e1000734, 2009
4022009
All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents
RA Swanson-Wagner, Y Jia, R DeCook, LA Borsuk, D Nettleton, ...
Proceedings of the National Academy of Sciences 103 (18), 6805-6810, 2006
3622006
Mining MEDLINE: abstracts, sentences, or phrases?
J Ding, D Berleant, D Nettleton, E Wurtele
Biocomputing 2002, 326-337, 2001
3052001
Developmental transcript profiling of cyst nematode feeding cells in soybean roots
N Ithal, J Recknor, D Nettleton, T Maier, TJ Baum, MG Mitchum
Molecular Plant-Microbe Interactions 20 (5), 510-525, 2007
2242007
Interaction-dependent gene expression in Mla-specified response to barley powdery mildew
RA Caldo, D Nettleton, RP Wise
The Plant Cell 16 (9), 2514-2528, 2004
2182004
Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution
L Flagel, J Udall, D Nettleton, J Wendel
BMC biology 6 (1), 16, 2008
2142008
Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture
P Che, S Lall, D Nettleton, SH Howell
Plant Physiology 141 (2), 620-637, 2006
2112006
Arabidopsis gene expression changes during cyst nematode parasitism revealed by statistical analyses of microarray expression profiles
DP Puthoff, D Nettleton, SR Rodermel, TJ Baum
The Plant Journal 33 (5), 911-921, 2003
2112003
Parallel genome-wide expression profiling of host and pathogen during soybean cyst nematode infection of soybean
N Ithal, J Recknor, D Nettleton, L Hearne, T Maier, TJ Baum, MG Mitchum
Molecular Plant-Microbe Interactions 20 (3), 293-305, 2007
2012007
Roles of the HIF-1 hypoxia-inducible factor during hypoxia response in Caenorhabditis elegans
C Shen, D Nettleton, M Jiang, SK Kim, JA Powell-Coffman
Journal of Biological Chemistry 280 (21), 20580-20588, 2005
1892005
Detecting differential expression in RNA-sequence data using quasi-likelihood with shrunken dispersion estimates
SP Lund, D Nettleton, DJ McCarthy, GK Smyth
Statistical applications in genetics and molecular biology 11 (5), 2012
1782012
Mu transposon insertion sites and meiotic recombination events co-localize with epigenetic marks for open chromatin across the maize genome
S Liu, CT Yeh, T Ji, K Ying, H Wu, HM Tang, Y Fu, D Nettleton, ...
PLoS genetics 5 (11), e1000733, 2009
1692009
Isolation, characterization, and pericycle-specific transcriptome analyses of the novel maize lateral and seminal root initiation mutant rum1
K Woll, LA Borsuk, H Stransky, D Nettleton, PS Schnable, ...
Plant Physiology 139 (3), 1255-1267, 2005
1612005
Controlling the proportion of false positives in multiple dependent tests
RL Fernando, D Nettleton, BR Southey, JCM Dekkers, MF Rothschild, ...
Genetics 166 (1), 611-619, 2004
1612004
Gene mapping via bulked segregant RNA-Seq (BSR-Seq)
S Liu, CT Yeh, HM Tang, D Nettleton, PS Schnable
PloS one 7 (5), e36406, 2012
1572012
Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.)
K Ohtsu, MB Smith, SJ Emrich, LA Borsuk, R Zhou, T Chen, X Zhang, ...
The Plant Journal 52 (3), 391-404, 2007
1502007
Genetic regulation of gene expression during shoot development in Arabidopsis
R DeCook, S Lall, D Nettleton, SH Howell
Genetics 172 (2), 1155-1164, 2006
1482006
Spatial Analysis of Arabidopsis thaliana Gene Expression in Response to Turnip mosaic virus Infection
C Yang, R Guo, F Jie, D Nettleton, J Peng, T Carr, JM Yeakley, JB Fan, ...
Molecular plant-microbe interactions 20 (4), 358-370, 2007
1362007
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