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Dineika Chandrananda
Dineika Chandrananda
Senior Bioinformatics Fellow, Peter MacCallum Cancer Centre, Melbourne
Verified email at petermac.org
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Cited by
Year
Enhanced detection of circulating tumor DNA by fragment size analysis
F Mouliere, D Chandrananda, AM Piskorz, EK Moore, J Morris, ...
Science translational medicine 10 (466), eaat4921, 2018
8792018
ctDNA monitoring using patient-specific sequencing and integration of variant reads
JCM Wan, K Heider, D Gale, S Murphy, E Fisher, F Mouliere, ...
Science translational medicine 12 (548), eaaz8084, 2020
1572020
Detection of cell‐free DNA fragmentation and copy number alterations in cerebrospinal fluid from glioma patients
F Mouliere, R Mair, D Chandrananda, F Marass, CG Smith, J Su, J Morris, ...
EMBO molecular medicine 10 (12), e9323, 2018
1542018
High-resolution characterization of sequence signatures due to non-random cleavage of cell-free DNA
D Chandrananda, NP Thorne, M Bahlo
BMC medical genomics 8, 1-19, 2015
1482015
Association of plasma and urinary mutant DNA with clinical outcomes in muscle invasive bladder cancer
KM Patel, KE Van Der Vos, CG Smith, F Mouliere, D Tsui, J Morris, ...
Scientific Reports 7 (1), 5554, 2017
1052017
Effects of collection and processing procedures on plasma circulating cell-free DNA from cancer patients
B Risberg, DWY Tsui, H Biggs, ARVM de Almagro, SJ Dawson, ...
The Journal of Molecular Diagnostics 20 (6), 883-892, 2018
952018
Comprehensive characterization of cell-free tumor DNA in plasma and urine of patients with renal tumors
CG Smith, T Moser, F Mouliere, J Field-Rayner, M Eldridge, AL Riediger, ...
Genome medicine 12, 1-17, 2020
922020
Measurement of plasma cell-free mitochondrial tumor DNA improves detection of glioblastoma in patient-derived orthotopic xenograft models
R Mair, F Mouliere, CG Smith, D Chandrananda, D Gale, F Marass, ...
Cancer research 79 (1), 220-230, 2019
872019
Fragmentation patterns and personalized sequencing of cell‐free DNA in urine and plasma of glioma patients
F Mouliere, CG Smith, K Heider, J Su, Y van der Pol, M Thompson, ...
EMBO molecular medicine 13 (8), e12881, 2021
802021
Dynamics of multiple resistance mechanisms in plasma DNA during EGFR‐targeted therapies in non‐small cell lung cancer
DWY Tsui, M Murtaza, ASC Wong, OM Rueda, CG Smith, ...
EMBO molecular medicine 10 (6), e7945, 2018
672018
Characteristics, origin, and potential for cancer diagnostics of ultrashort plasma cell-free DNA
I Hudecova, CG Smith, R Hänsel-Hertsch, CS Chilamakuri, JA Morris, ...
Genome research 32 (2), 215-227, 2022
542022
Refined characterization of circulating tumor DNA through biological feature integration
H Markus, D Chandrananda, E Moore, F Mouliere, J Morris, JD Brenton, ...
Scientific reports 12 (1), 1928, 2022
382022
Selecting short DNA fragments in plasma improves detection of circulating tumour DNA
F Mouliere, AM Piskorz, D Chandrananda, E Moore, J Morris, CG Smith, ...
BioRxiv, 134437, 2017
342017
Investigating and correcting plasma DNA sequencing coverage bias to enhance aneuploidy discovery
D Chandrananda, NP Thorne, D Ganesamoorthy, DL Bruno, Y Benjamini, ...
PLoS One 9 (1), e86993, 2014
322014
Enhanced detection of circulating tumor DNA by fragment size analysis. Sci. Transl. Med. 10, eaat4921
F Mouliere, D Chandrananda, AM Piskorz, EK Moore, J Morris, ...
272018
The effect of preanalytical and physiological variables on cell-free DNA fragmentation
Y van der Pol, N Moldovan, S Verkuijlen, J Ramaker, D Boers, W Onstenk, ...
Clinical Chemistry 68 (6), 803-813, 2022
262022
Circulating cell free DNA during definitive chemo-radiotherapy in non-small cell lung cancer patients–initial observations
L Nygård, LB Ahlborn, GF Persson, D Chandrananda, JW Langer, ...
PLoS One 15 (4), e0231884, 2020
172020
Real‐time analysis of the cancer genome and fragmentome from plasma and urine cell‐free DNA using nanopore sequencing
Y van Der Pol, NA Tantyo, N Evander, AE Hentschel, BMM Wever, ...
EMBO molecular medicine 15 (12), e17282, 2023
142023
Integrated radiogenomics models predict response to neoadjuvant chemotherapy in high grade serous ovarian cancer
M Crispin-Ortuzar, R Woitek, MAV Reinius, E Moore, L Beer, V Bura, ...
Nature communications 14 (1), 6756, 2023
112023
The landscape of cell-free mitochondrial DNA in liquid biopsy for cancer detection
Y van der Pol, N Moldovan, J Ramaker, S Bootsma, KJ Lenos, ...
Genome Biology 24 (1), 229, 2023
92023
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