A genome-wide analysis of human pluripotent stem cell-derived endothelial cells in 2D or 3D culture J Zhang, MP Schwartz, Z Hou, Y Bai, H Ardalani, S Swanson, J Steill, ... Stem cell reports 8 (4), 907-918, 2017 | 52 | 2017 |
A simple text mining approach for ranking pairwise associations in biomedical applications F Kuusisto, J Steill, Z Kuang, J Thomson, D Page, R Stewart AMIA summits on translational science proceedings 2017, 166, 2017 | 33 | 2017 |
Generation of anti-GD2 CAR macrophages from human pluripotent stem cells for cancer immunotherapies J Zhang, S Webster, B Duffin, MN Bernstein, J Steill, S Swanson, ... Stem Cell Reports 18 (2), 585-596, 2023 | 19 | 2023 |
Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells J Brown, C Barry, MT Schmitz, C Argus, JM Bolin, MP Schwartz, ... PLoS computational biology 17 (3), e1008778, 2021 | 15 | 2021 |
Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics C Barry, MT Schmitz, C Argus, JM Bolin, MD Probasco, N Leng, BM Duffin, ... PLOS Computational Biology 15 (12), e1007543, 2019 | 13 | 2019 |
Automated extraction and visualization of protein–protein interaction networks and beyond: a text-mining protocol K Raja, J Natarajan, F Kuusisto, J Steill, I Ross, J Thomson, R Stewart Protein-Protein Interaction Networks: Methods and Protocols, 13-34, 2020 | 10 | 2020 |
Parallel and serial applications of the RETRAN-03 power plant simulation code using domain decomposition and Krylov subspace methods TJ Downar, JY Wu, J Steill, R Janardhan Nuclear technology 117 (2), 133-150, 1997 | 7 | 1997 |
A high-quality blue whale genome, segmental duplications, and historical demography YV Bukhman, PA Morin, S Meyer, LF Chu, JK Jacobsen, ... Molecular Biology and Evolution 41 (3), msae036, 2024 | 4 | 2024 |
SKiM-A generalized literature-based discovery system for uncovering novel biomedical knowledge from PubMed K Raja, J Steill, I Ross, LC Tsoi, F Kuusisto, Z Ni, M Livny, J Thomson, ... bioRxiv, 2020.10. 16.343012, 2020 | 4 | 2020 |
KinderMiner Web: a simple web tool for ranking pairwise associations in biomedical applications F Kuusisto, D Ng, J Steill, I Ross, M Livny, J Thomson, D Page, R Stewart F1000Research 9, 2020 | 3 | 2020 |
Efficient derivation of transgene-free porcine induced pluripotent stem cells enables in vitro modeling of species-specific developmental timing JV Conrad, S Meyer, PS Ramesh, JA Neira, M Rusteika, D Mamott, ... Stem Cell Reports 18 (12), 2328-2343, 2023 | 2 | 2023 |
Effects of an In Vivo Vaping Challenge on In Vitro Interleukin‐6 Biosynthesis Pathways in Arterial Endothelial Cells Derived From Human Embryonic Stem Cells MC Tattersall, S Esnault, R Stewart, DT Vereide, S Swanson, J Zhang, ... Journal of the American Heart Association 12 (14), e030139, 2023 | 1 | 2023 |
Macrophages undergo functionally significant reprogramming of nucleotide metabolism upon classical activation SV John, GL Seim, BJ Erazo-Flores, J Steill, J Freeman, JA Votava, ... bioRxiv, 2023.12. 27.573447, 2023 | | 2023 |
Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models RJ Millikin, K Raja, J Steill, C Lock, X Tu, I Ross, LC Tsoi, F Kuusisto, Z Ni, ... BMC bioinformatics 24 (1), 412, 2023 | | 2023 |
Effects of Nicotine-Containing Product Challenges on Interleukin-6 Pathway Expression in Human Pluripotent-Derived Arterial Endothelial Cells: The Clues Study MC Tattersall, S Esnault, R Stewart, S Swanson, J Steill, CE Korcarz, ... Circulation 146 (Suppl_1), A13269-A13269, 2022 | | 2022 |
peer review: 2 approved F Kuusisto, D Ng, J Steill, I Ross, M Livny, J Thomson, D Page, R Stewart | | 2021 |
KinderMiner Web: a simple web tool for ranking pairwise associations in biomedical applications K Finn, D Ng, J Steill, I Ross, L Miron, J Thomson, D Page, R Stewart F1000Research 9, 2021 | | 2021 |
KinderMiner Web: a simple web tool for ranking pairwis e associations in biomedical applications [version 1; peer F Kuusisto, D Ng, J Steill, I Ross, M Livny, J Thomson, D Page, R Stewart | | |