Daniel Doerr
Cited by
Cited by
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
Orthology detection combining clustering and synteny for very large datasets
M Lechner, M Hernandez-Rosales, D Doerr, N Wieseke, A Thévenin, ...
PLoS one 9 (8), e105015, 2014
Active and repressed biosynthetic gene clusters have spatially distinct chromosome states
HW Nützmann, D Doerr, A Ramírez-Colmenero, JE Sotelo-Fonseca, ...
Proceedings of the National Academy of Sciences 117 (24), 13800-13809, 2020
Computing the rearrangement distance of natural genomes
L Bohnenkämper, MDV Braga, D Doerr, J Stoye
International Conference on Research in Computational Molecular Biology, 3-18, 2020
Gene family assignment-free comparative genomics
D Doerr, A Thévenin, J Stoye
BMC bioinformatics 13, 1-10, 2012
The potential of family-free genome comparison
MDV Braga, C Chauve, D Doerr, K Jahn, J Stoye, A Thévenin, R Wittler
Models and Algorithms for Genome Evolution, 287-307, 2013
Identifying gene clusters by discovering common intervals in indeterminate strings
D Doerr, J Stoye, S Böcker, K Jahn
BMC genomics 15, 1-12, 2014
Accelerating investigation of food-borne disease outbreaks using pro-active geospatial modeling of food supply chains
D Doerr, K Hu, S Renly, S Edlund, M Davis, JH Kaufman, J Lessler, ...
Proceedings of the First ACM SIGSPATIAL International Workshop on Use of GIS …, 2012
Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes
N Luhmann, D Doerr, C Chauve
Microbial genomics 3 (9), 2017
GraphTeams: a method for discovering spatial gene clusters in Hi-C sequencing data
T Schulz, J Stoye, D Doerr
BMC genomics 19, 59-70, 2018
Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants
DP Rubert, FV Martinez, J Stoye, D Doerr
BMC genomics 21 (2), 1-11, 2020
Family-free genome comparison
D Doerr, P Feijão, J Stoye
Comparative genomics: methods and protocols, 331-342, 2018
Horizontal Gene Transfer Phylogenetics: A Random Walk Approach
G Sevillya, D Doerr, Y Lerner, J Stoye, M Steel, S Snir
Molecular Biology and Evolution 37 (5), 1470-1479, 2020
Gene family-free genome comparison
D Dörr
PhD thesis, Universität Bielefeld, Bielefeld, Germany. 2016. https://pub …, 2015
The potential of family-free rearrangements towards gene orthology inference
DP Rubert, D Doerr, MDV Braga
Journal of bioinformatics and computational biology 19 (06), 2140014, 2021
The gene family-free median of three
D Doerr, M Balaban, P Feijão, C Chauve
Algorithms for Molecular Biology 12 (1), 1-14, 2017
New Genome Similarity Measures based on Conserved Gene Adjacencies
D Doerr, LAB Kowada, E Araujo, S Deshpande, S Dantas, BME Moret, ...
Journal of Computational Biology 24 (6), 616-634, 2017
Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions
D Doerr, I Gronau, S Moran, I Yavneh
Algorithms for Molecular Biology 7 (1), 1-16, 2012
Small parsimony for natural genomes in the DCJ-indel model
D Doerr, C Chauve
Journal of Bioinformatics and Computational Biology 19 (06), 2140009, 2021
Sequence-based synteny analysis of multiple large genomes
D Doerr, BME Moret
Comparative Genomics: Methods and Protocols, 317-329, 2018
The system can't perform the operation now. Try again later.
Articles 1–20