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Nikos Karaiskos
Nikos Karaiskos
Computational Staff Scientist, BIMSB / MDC
Verified email at mdc-berlin.de - Homepage
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Cited by
Cited by
Year
The Drosophila embryo at single-cell transcriptome resolution
N Karaiskos, P Wahle, J Alles, A Boltengagen, S Ayoub, C Kipar, C Kocks, ...
Science 358 (6360), 194-199, 2017
3792017
Gene expression cartography
M Nitzan, N Karaiskos, N Friedman, N Rajewsky
Nature 576 (7785), 132-137, 2019
2262019
Cell fixation and preservation for droplet-based single-cell transcriptomics
J Alles, N Karaiskos, SD Praktiknjo, S Grosswendt, P Wahle, PL Ruffault, ...
BMC biology 15 (1), 1-14, 2017
2182017
A single-cell transcriptome atlas of the mouse glomerulus
N Karaiskos, M Rahmatollahi, A Boltengagen, H Liu, M Hoehne, ...
Journal of the American Society of Nephrology: JASN 29 (8), 2060, 2018
1502018
FLAM-seq: full-length mRNA sequencing reveals principles of poly (A) tail length control
I Legnini, J Alles, N Karaiskos, S Ayoub, N Rajewsky
Nature methods 16 (9), 879-886, 2019
1312019
Defective metabolic programming impairs early neuronal morphogenesis in neural cultures and an organoid model of Leigh syndrome
G Inak, A Rybak-Wolf, P Lisowski, TM Pentimalli, R Jüttner, P Glažar, ...
Nature Communications 12 (1), 1929, 2021
632021
NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport
N Moriel, E Senel, N Friedman, N Rajewsky, N Karaiskos, M Nitzan
Nature Protocols 16 (9), 4177-4200, 2021
612021
Introduction to quantum integrability
A Doikou, S Evangelisti, G Feverati, N Karaiskos
International Journal of Modern Physics A 25 (17), 3307-3351, 2010
572010
Human muscle-derived CLEC14A-positive cells regenerate muscle independent of PAX7
A Marg, H Escobar, N Karaiskos, SA Grunwald, E Metzler, J Kieshauer, ...
Nature communications 10 (1), 5776, 2019
322019
Single-cell transcriptomics reveals common epithelial response patterns in human acute kidney injury
C Hinze, C Kocks, J Leiz, N Karaiskos, A Boltengagen, S Cao, ...
Genome Medicine 14 (1), 1-18, 2022
282022
Kidney single-cell transcriptomes predict spatial corticomedullary gene expression and tissue osmolality gradients
C Hinze, N Karaiskos, A Boltengagen, K Walentin, K Redo, N Himmerkus, ...
Journal of the American Society of Nephrology: JASN 32 (2), 291, 2021
282021
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data
J Tanevski, T Nguyen, B Truong, N Karaiskos, ME Ahsen, X Zhang, C Shu, ...
Life Science Alliance 3 (11), 2020
24*2020
Sigma models in the presence of dynamical point-like defects
A Doikou, N Karaiskos
Nuclear Physics B 867 (3), 872-886, 2013
192013
Spacemake: processing and analysis of large-scale spatial transcriptomics data
TR Sztanka-Toth, M Jens, N Karaiskos, N Rajewsky
GigaScience 11, 2022
152022
Brane embeddings in sphere submanifolds
N Karaiskos, K Sfetsos, E Tsatis
Classical and Quantum Gravity 29 (2), 025011, 2011
142011
Charting a tissue from single-cell transcriptomes
M Nitzan, N Karaiskos, N Friedman, N Rajewsky
bioRxiv, 2018
132018
New reflection matrices for the Uq (gl (m| n)) case
A Doikou, N Karaiskos
Journal of Statistical Mechanics: Theory and Experiment 2009 (09), L09004, 2009
112009
The neuroinflammatory interleukin-12 signaling pathway drives Alzheimer’s disease-like pathology by perturbing oligodendrocyte survival and neuronal homeostasis
S Schneeberger, SJ Kim, P Eede, A Boltengagen, C Braeuning, ...
BioRxiv, 2021.04. 25.441313, 2021
82021
Transmission amplitudes from Bethe ansatz equations
A Doikou, N Karaiskos
Journal of High Energy Physics 2013 (2), 1-24, 2013
82013
Image-based representation of massive spatial transcriptomics datasets
S Preibisch, N Karaiskos, N Rajewsky
bioRxiv, 2021.12. 07.471629, 2022
72022
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