| Evolving BioAssay Ontology (BAO): modularization, integration and applications S Abeyruwan, UD Vempati, H Küçük-McGinty, U Visser, A Koleti, A Mir, ... Journal of biomedical semantics 5, 1-22, 2014 | 96 | 2014 |
| Drug target ontology to classify and integrate drug discovery data Y Lin, S Mehta, H Küçük-McGinty, JP Turner, D Vidovic, M Forlin, A Koleti, ... Journal of biomedical semantics 8, 1-16, 2017 | 75 | 2017 |
| KeyPathwayMiner: detecting case-specific biological pathways using expression data N Alcaraz, H Kücük, J Weile, A Wipat, J Baumbach Internet Mathematics 7 (4), 299-313, 2011 | 58 | 2011 |
| Links between critical proteins drive the controllability of protein interaction networks S Wuchty, T Boltz, H Küçük‐McGinty Proteomics 17 (10), 1700056, 2017 | 25 | 2017 |
| Deep learning accurately predicts food categories and nutrients based on ingredient statements P Ma, Z Zhang, Y Li, N Yu, J Sheng, HK McGinty, Q Wang, JKC Ahuja Food Chemistry 391, 133243, 2022 | 14 | 2022 |
| Maximizing data value for biopharma through FAIR and quality implementation: FAIR plus Q I Harrow, R Balakrishnan, HK McGinty, T Plasterer, M Romacker Drug Discovery Today 27 (5), 1441-1447, 2022 | 11 | 2022 |
| Food process ontology requirements D Dooley, M Weber, L Ibanescu, M Lange, L Chan, L Soldatova, C Yang, ... Semantic Web, 1-32, 2022 | 7 | 2022 |
| Standardization of assay representation in the Ontology for Biomedical Investigations R Vita, J Zheng, R Jackson, D Dooley, JA Overton, MA Miller, DC Berrios, ... Database 2021, baab040, 2021 | 6 | 2021 |
| How to develop a drug target ontology: KNowledge Acquisition and Representation Methodology (KNARM) H Küçük McGinty, U Visser, S Schürer Bioinformatics and Drug Discovery, 49-69, 2019 | 5 | 2019 |
| KNowledge Acquisition and Representation Methodology (KNARM) and Its Applications HK McGinty University of Miami, 2018 | 4 | 2018 |
| Tutorials at the web conference 2023 V Fionda, O Hartig, R Abdolazimi, S Amer-Yahia, H Chen, X Chen, P Cui, ... Companion Proceedings of the ACM Web Conference 2023, 648-658, 2023 | 3 | 2023 |
| Sustainable Grain Transportation in Ukraine Amidst War Utilizing KNARM and KnowWhereGraph Y Zhang, A Broyaka, J Kastens, AM Featherstone, C Shimizu, P Hitzler, ... Companion Proceedings of the ACM Web Conference 2023, 742-745, 2023 | 1 | 2023 |
| Building Concordant Ontologies for Drug Discovery. H Küçük-McGinty, S Mehta, Y Lin, N Nabizadeh, V Stathias, D Vidovic, ... ICBO/BioCreative, 2016 | 1 | 2016 |
| Besoins ontologiques pour la transformation des aliments D Dooley, M Weber, LL Ibanescu, M Lange, L Chan, L Soldatova, C Yang, ... IC2023: 34es Journées francophones d'Ingénierie des Connaissances, 2023 | | 2023 |
| Leveraging Existing Literature on the Web and Deep Neural Models to Build a Knowledge Graph Focused on Water Quality and Health Risks N Gautam, D Shumway, M Kowalcyk, S Khanal, D Caragea, C Caragea, ... Proceedings of the ACM Web Conference 2023, 4161-4171, 2023 | | 2023 |
| WOP 2021: Workshop on Ontology Design and Patterns 2021: Proceedings of the 12th Workshop on Ontology Design and Patterns (WOP 2021) co-located with the 20th International … K Hammar, C Shimizu, HK McGinty, L Asprino, VA Carriero Proceedings of the 12th Workshop on Ontology Design and Patterns (WOP 2021 …, 2021 | | 2021 |
| BioHarmony across semantic drug discovery data streams H McGinty, B Bunin American Chemical Society SciMeetings 1 (2), 2020 | | 2020 |
| Extending machine learning capabilities for semi-automated annotation of biological assays in BioAssay Express P Gedeck, H McGinty, B Bunin, A Clark ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018 | | 2018 |
| OntoloBridge: A semi-automated ontology update request system J Turner, A Clark, H McGinty, B Bunin, S Schurer ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018 | | 2018 |
| Adding value to public data using the BioAssay Express: Using semantic web axioms and machine learning to support annotation H Kucuk-McGinty, J Kranz, B Bunin, A Clark ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017 | | 2017 |
