Carsen Stringer
Carsen Stringer
Group Leader, HHMI Janelia Research Campus
Verified email at - Homepage
Cited by
Cited by
Cellpose: a generalist algorithm for cellular segmentation
C Stringer, T Wang, M Michaelos, M Pachitariu
Nature methods 18 (1), 100-106, 2021
Spontaneous behaviors drive multidimensional, brainwide activity
C Stringer, M Pachitariu, N Steinmetz, CB Reddy, M Carandini, KD Harris
Science 364 (6437), 255, 2019
Suite2p: beyond 10,000 neurons with standard two-photon microscopy
M Pachitariu, C Stringer, S Schröder, M Dipoppa, LF Rossi, M Carandini, ...
BioRxiv, 061507, 2016
High-dimensional geometry of population responses in visual cortex
C Stringer, M Pachitariu, N Steinmetz, M Carandini, KD Harris
Nature, 1, 2019
Cellpose 2.0: how to train your own model
M Pachitariu, C Stringer
Nature methods 19 (12), 1634-1641, 2022
Robustness of spike deconvolution for neuronal calcium imaging
M Pachitariu, C Stringer, KD Harris
Journal of Neuroscience 38 (37), 7976-7985, 2018
High-precision coding in visual cortex
C Stringer, M Michaelos, D Tsyboulski, SE Lindo, M Pachitariu
Cell 184 (10), 2767-2778. e15, 2021
Computational processing of neural recordings from calcium imaging data
C Stringer, M Pachitariu
Current opinion in neurobiology 55, 22-31, 2019
Inhibitory control of correlated intrinsic variability in cortical networks
C Stringer, M Pachitariu, NA Steinmetz, M Okun, P Bartho, KD Harris, ...
Elife 5, e19695, 2016
Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories
E Suarez, S Lettieri, MC Zwier, CA Stringer, SR Subramanian, LT Chong, ...
Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation
KJ Cutler, C Stringer, TW Lo, L Rappez, N Stroustrup, S Brook Peterson, ...
Nature methods 19 (11), 1438-1448, 2022
Solving the spike sorting problem with Kilosort
M Pachitariu, S Sridhar, C Stringer
bioRxiv, 2023.01. 07.523036, 2023
The importance of accounting for movement when relating neuronal activity to sensory and cognitive processes
E Zagha, JC Erlich, S Lee, G Lur, DH O'Connor, NA Steinmetz, C Stringer, ...
Journal of Neuroscience 42 (8), 1375-1382, 2022
Not so spontaneous: Multi-dimensional representations of behaviors and context in sensory areas
L Avitan, C Stringer
Neuron 110 (19), 3064-3075, 2022
Neuromatch Academy: Teaching computational neuroscience with global accessibility
T van Viegen, A Akrami, K Bonnen, E DeWitt, A Hyafil, H Ledmyr, ...
Trends in cognitive sciences 25 (7), 535-538, 2021
Facemap: a framework for modeling neural activity based on orofacial tracking
A Syeda, L Zhong, R Tung, W Long, M Pachitariu, C Stringer
Nature Neuroscience, 2023
Recordings of ten thousand neurons in visual cortex during spontaneous behaviors
C Stringer, M Pachitariu, CB Reddy, M Carandini, KD Harris
Database: figshare, 2018
Vagal sensory neurons mediate the Bezold–Jarisch reflex and induce syncope
JW Lovelace, J Ma, S Yadav, K Chhabria, H Shen, Z Pang, T Qi, R Sehgal, ...
Nature, 1-10, 2023
Recordings of 10,000 neurons in visual cortex in response to 2,800 natural images
C Stringer, M Pachitariu, M Carandini, K Harris
Figshare Repos, 2018
Rastermap: a discovery method for neural population recordings
C Stringer, L Zhong, A Syeda, F Du, M Kesa, M Pachitariu
bioRxiv, 2023.07. 25.550571, 2023
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