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Stefan Wyder
Stefan Wyder
University of Zurich / SIB Swiss Institute of Bioinformatics
Verified email at uzh.ch
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Year
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ...
Nucleic acids research 47 (D1), D607-D613, 2019
137612019
STRING v10: protein–protein interaction networks, integrated over the tree of life
D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ...
Nucleic acids research 43 (D1), D447-D452, 2015
99442015
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
D Szklarczyk, JH Morris, H Cook, M Kuhn, S Wyder, M Simonovic, ...
Nucleic acids research, gkw937, 2016
67742016
The genome of the model beetle and pest Tribolium castaneum.
S Richards, RA Gibbs, GM Weinstock, SJ Brown, R Denell, RW Beeman, ...
Nature 452 (7190), 949-955, 2008
14252008
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector
V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ...
Science 316 (5832), 1718-1723, 2007
13292007
Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species
JH Werren, S Richards, CA Desjardins, O Niehuis, J Gadau, ...
Science 327 (5963), 343-348, 2010
9282010
Siderophore cheating and cheating resistance shape competition for iron in soil and freshwater Pseudomonas communities
E Butaitė, M Baumgartner, S Wyder, R Kümmerli
Nature communications 8 (1), 414, 2017
1872017
Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species
F Menardo, CR Praz, S Wyder, R Ben-David, S Bourras, H Matsumae, ...
Nature Genetics 48 (2), 201-205, 2016
1762016
Quantification of ortholog losses in insects and vertebrates
S Wyder, EV Kriventseva, R Schröder, T Kadowaki, EM Zdobnov
Genome biology 8, 1-11, 2007
882007
A teratocarcinoma-like human embryonic stem cell (hESC) line and four hESC lines reveal potentially oncogenic genomic changes
O Hovatta, M Jaconi, V Töhönen, F Béna, S Gimelli, A Bosman, F Holm, ...
PloS one 5 (4), e10263, 2010
672010
Comprehensive validation of published immunohistochemical prognostic biomarkers of prostate cancer-what has gone wrong? A blueprint for the way forward in biomarker studies.
F Huber, M Montani, T Sulser, R Jaggi, P Wild, H Moch, H Gevensleben, ...
Br J Cancer, 2014
632014
Sociality is linked to rates of protein evolution in a highly social insect
BG Hunt, S Wyder, N Elango, JH Werren, EM Zdobnov, SV Yi, ...
Molecular biology and evolution 27 (3), 497-500, 2010
542010
The SIB Swiss Institute of Bioinformatics" resources: focus on curated databases
Nucleic Acids Research 44 (EPFL-ARTICLE-217833), D27-D37, 2016
51*2016
Characterization of Chelonus inanitus polydnavirus segments: sequences and analysis, excision site and demonstration of clustering
S Wyder, A Tschannen, A Hochuli, A Gruber, V Saladin, S Zumbach, ...
Journal of general virology 83 (1), 247-256, 2002
502002
Ovary development and polydnavirus morphogenesis in the parasitic wasp Chelonus inanitus. I. Ovary morphogenesis, amplification of viral DNA and ecdysteroid …
D Marti, C Grossniklaus-Bürgin, S Wyder, T Wyler, B Lanzrein
Journal of general virology 84 (5), 1141-1150, 2003
492003
Genetic evidence supporting the association of protease and protease inhibitor genes with inflammatory bowel disease: a systematic review
I Cleynen, P Jüni, GE Bekkering, E Nüesch, CT Mendes, S Schmied, ...
PLoS One 6 (9), e24106, 2011
482011
The Aedes aegypti genome: a comparative perspective
RM Waterhouse, S Wyder, EM Zdobnov
Insect Molecular Biology 17 (1), 1-8, 2008
422008
Environmental determinants of pyoverdine production, exploitation and competition in natural Pseudomonas communities
E Butaitė, J Kramer, S Wyder, R Kümmerli
Environmental microbiology 20 (10), 3629-3642, 2018
392018
Fate of polydnavirus DNA of the egg–larval parasitoid Chelonus inanitus in the host Spodoptera littoralis
S Wyder, F Blank, B Lanzrein
Journal of insect physiology 49 (5), 491-500, 2003
392003
Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances
J Kim, R Cunningham, B James, S Wyder, JD Gibson, O Niehuis, ...
PLoS computational biology 6 (1), e1000652, 2010
352010
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