Patrick H. Bradley
Patrick H. Bradley
Gladstone Institute, UCSF
Verified email at gladstone.ucsf.edu - Homepage
TitleCited byYear
Growth-limiting intracellular metabolites in yeast growing under diverse nutrient limitations
VM Boer, CA Crutchfield, PH Bradley, D Botstein, JD Rabinowitz
Molecular biology of the cell 21 (1), 198-211, 2010
1802010
Coordinated concentration changes of transcripts and metabolites in Saccharomyces cerevisiae
PH Bradley, MJ Brauer, JD Rabinowitz, OG Troyanskaya
PLoS computational biology 5 (1), e1000270, 2009
1062009
Yeast cells can access distinct quiescent states
MM Klosinska, CA Crutchfield, PH Bradley, JD Rabinowitz, JR Broach
Genes & development 25 (4), 336-349, 2011
1012011
Proteobacteria explain significant functional variability in the human gut microbiome
PH Bradley, KS Pollard
Microbiome 5 (1), 36, 2017
382017
Automated and accurate estimation of gene family abundance from shotgun metagenomes
S Nayfach, PH Bradley, SK Wyman, TJ Laurent, A Williams, JA Eisen, ...
PLoS computational biology 11 (11), e1004573, 2015
272015
A new system for comparative functional genomics of Saccharomyces yeasts
AA Caudy, Y Guan, Y Jia, C Hansen, C DeSevo, AP Hayes, J Agee, ...
Genetics 195 (1), 275-287, 2013
272013
Phylogeny-corrected identification of microbial gene families relevant to human gut colonization
PH Bradley, S Nayfach, KS Pollard
PLoS computational biology 14 (8), e1006242, 2018
92018
Phylogenetic portrait of the Saccharomyces cerevisiae functional genome
PA Gibney, MJ Hickman, PH Bradley, JC Matese, D Botstein
G3: Genes, Genomes, Genetics 3 (8), 1335-1340, 2013
52013
Minor isozymes tailor yeast metabolism to carbon availability
PH Bradley, PA Gibney, D Botstein, OG Troyanskaya, JD Rabinowitz
MSystems 4 (1), e00170-18, 2019
2019
phylogenize: correcting for phylogeny reveals genes associated with microbial distributions
PH Bradley, KS Pollard
bioRxiv, 425231, 2019
2019
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Articles 1–10