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Anupriya Tripathi
Anupriya Tripathi
Principal AI Scientist at Prescient Design (Genentech)
Verified email at gene.com
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Cited by
Cited by
Year
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
133442019
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
21932017
Best practices for analysing microbiomes
R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ...
Nature Reviews Microbiology 16 (7), 410-422, 2018
14592018
The gut–liver axis and the intersection with the microbiome
A Tripathi, J Debelius, DA Brenner, M Karin, R Loomba, B Schnabl, ...
Nature reviews Gastroenterology & hepatology 15 (7), 397-411, 2018
10812018
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
9262018
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature methods 17 (9), 905-908, 2020
8052020
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), 10.1128/msystems. 00031-18, 2018
6532018
Global chemical effects of the microbiome include new bile-acid conjugations
RA Quinn, AV Melnik, A Vrbanac, T Fu, KA Patras, MP Christy, Z Bodai, ...
Nature 579 (7797), 123-129, 2020
3692020
A novel sparse compositional technique reveals microbial perturbations
C Martino, JT Morton, CA Marotz, LR Thompson, A Tripathi, R Knight, ...
MSystems 4 (1), 10.1128/msystems. 00016-19, 2019
3002019
Microbiome 101: studying, analyzing, and interpreting gut microbiome data for clinicians
C Allaband, D McDonald, Y Vázquez-Baeza, JJ Minich, A Tripathi, ...
Clinical gastroenterology and hepatology 17 (2), 218-230, 2019
2692019
A gut microbiome signature for cirrhosis due to nonalcoholic fatty liver disease
C Caussy, A Tripathi, G Humphrey, S Bassirian, S Singh, C Faulkner, ...
Nature communications 10 (1), 1406, 2019
2682019
Gut microbiota offers universal biomarkers across ethnicity in inflammatory bowel disease diagnosis and infliximab response prediction
Y Zhou, ZZ Xu, Y He, Y Yang, L Liu, Q Lin, Y Nie, M Li, F Zhi, S Liu, A Amir, ...
MSystems 3 (1), 10.1128/msystems. 00188-17, 2018
2082018
Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort
Y Qin, AS Havulinna, Y Liu, P Jousilahti, SC Ritchie, A Tokolyi, ...
Nature Genetics 54 (2), 134-142, 2022
1992022
Intermittent hypoxia and hypercapnia, a hallmark of obstructive sleep apnea, alters the gut microbiome and metabolome
A Tripathi, AV Melnik, J Xue, O Poulsen, MJ Meehan, G Humphrey, ...
Msystems 3 (3), 10.1128/msystems. 00020-18, 2018
1032018
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree
A Tripathi, Y Vázquez-Baeza, JM Gauglitz, M Wang, K Dührkop, ...
Nature chemical biology 17 (2), 146-151, 2021
912021
Coupling targeted and untargeted mass spectrometry for metabolome-microbiome-wide association studies of human fecal samples
AV Melnik, RR da Silva, ER Hyde, AA Aksenov, F Vargas, A Bouslimani, ...
Analytical chemistry 89 (14), 7549-7559, 2017
812017
Links between gut microbiome composition and fatty liver disease in a large population sample
MO Ruuskanen, F Åberg, V Männistö, AS Havulinna, G Méric, Y Liu, ...
Gut microbes 13 (1), 1888673, 2021
592021
Early prediction of incident liver disease using conventional risk factors and gut-microbiome-augmented gradient boosting
Y Liu, G Meric, AS Havulinna, SM Teo, F Åberg, M Ruuskanen, J Sanders, ...
Cell Metabolism 34 (5), 719-730. e4, 2022
572022
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages
JM Gauglitz, CM Aceves, AA Aksenov, G Aleti, J Almaliti, A Bouslimani, ...
Food chemistry 302, 125290, 2020
572020
Triclosan leads to dysregulation of the metabolic regulator FGF21 exacerbating high fat diet-induced nonalcoholic fatty liver disease
MF Yueh, F He, C Chen, C Vu, A Tripathi, R Knight, M Karin, S Chen, ...
Proceedings of the National Academy of Sciences 117 (49), 31259-31266, 2020
512020
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