| Iterative correction of Hi-C data reveals hallmarks of chromosome organization M Imakaev, G Fudenberg, RP McCord, N Naumova, A Goloborodko, ... Nature methods 9 (10), 999, 2012 | 1341 | 2012 |
| Hi–C: a comprehensive technique to capture the conformation of genomes JM Belton, RP McCord, JH Gibcus, N Naumova, Y Zhan, J Dekker Methods 58 (3), 268-276, 2012 | 1048 | 2012 |
| Condensin-driven remodelling of X chromosome topology during dosage compensation E Crane, Q Bian, RP McCord, BR Lajoie, BS Wheeler, EJ Ralston, ... Nature 523 (7559), 240, 2015 | 834 | 2015 |
| Spatial organization of the mouse genome and its role in recurrent chromosomal translocations Y Zhang, RP McCord, YJ Ho, BR Lajoie, DG Hildebrand, AC Simon, ... Cell 148 (5), 908-921, 2012 | 582 | 2012 |
| High-resolution DNA-binding specificity analysis of yeast transcription factors C Zhu, KJRP Byers, RP McCord, Z Shi, MF Berger, DE Newburger, ... Genome research, 2009 | 489 | 2009 |
| Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments VC Seitan, AJ Faure, Y Zhan, RP McCord, BR Lajoie, E Ing-Simmons, ... Genome research, 2013 | 365 | 2013 |
| Correlated alterations in genome organization, histone methylation, and DNA–lamin A/C interactions in Hutchinson-Gilford progeria syndrome RP McCord, A Nazario-Toole, H Zhang, PS Chines, Y Zhan, MR Erdos, ... Genome research 23 (2), 260-269, 2013 | 345 | 2013 |
| MORC family ATPases required for heterochromatin condensation and gene silencing G Moissiard, SJ Cokus, J Cary, S Feng, AC Billi, H Stroud, D Husmann, ... Science, 1221472, 2012 | 319 | 2012 |
| Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells AR Barutcu, BR Lajoie, RP McCord, CE Tye, D Hong, TL Messier, ... Genome biology 16 (1), 214, 2015 | 215 | 2015 |
| Chromosome conformation capture and beyond: toward an integrative view of chromosome structure and function RP McCord, N Kaplan, L Giorgetti Molecular Cell 77 (4), 688-708, 2020 | 165 | 2020 |
| Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights R Gordân, KF Murphy, RP McCord, C Zhu, A Vedenko, ML Bulyk Genome biology 12 (12), R125, 2011 | 142 | 2011 |
| SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells AR Barutcu, BR Lajoie, AJ Fritz, RP McCord, JA Nickerson, ... Genome research, 2016 | 101 | 2016 |
| Radiation-induced DNA damage and repair effects on 3D genome organization JT Sanders, TF Freeman, Y Xu, R Golloshi, MA Stallard, AM Hill, ... Nature communications 11 (1), 1-14, 2020 | 90 | 2020 |
| RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells AR Barutcu, D Hong, BR Lajoie, RP McCord, AJ van Wijnen, JB Lian, ... Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1859 (11 …, 2016 | 69 | 2016 |
| Yeast one-hybrid assays for gene-centered human gene regulatory network mapping JS Reece-Hoyes, AR Barutcu, RP McCord, JS Jeong, L Jiang, ... Nature methods 8 (12), 1050, 2011 | 54 | 2011 |
| Analysis of force generation during flagellar assembly through optical trapping of free‐swimming Chlamydomonas reinhardtii RP McCord, JN Yukich, KK Bernd Cell motility and the cytoskeleton 61 (3), 137-144, 2005 | 42 | 2005 |
| Inferring condition‐specific transcription factor function from DNA binding and gene expression data RP McCord, MF Berger, AA Philippakis, ML Bulyk Molecular systems biology 3 (1), 100, 2007 | 39 | 2007 |
| Iteratively improving Hi-C experiments one step at a time R Golloshi, J Sanders, RP McCord Methods, 2018 | 31 | 2018 |
| SMILE: Mutual Information Learning for Integration of Single Cell Omics Data Y Xu, P Das, RP McCord bioRxiv, 2021 | 26 | 2021 |
| Rapid irreversible transcriptional reprogramming in human stem cells accompanied by discordance between replication timing and chromatin compartment V Dileep, KA Wilson, C Marchal, X Lyu, PA Zhao, B Li, A Poulet, ... Stem cell reports 13 (1), 193-206, 2019 | 25 | 2019 |
