| PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes Z Gao, J Zhang, R Bonasio, F Strino, A Sawai, F Parisi, Y Kluger, ... Molecular cell 45 (3), 344-356, 2012 | 973 | 2012 |
| Ranking and combining multiple predictors without labeled data F Parisi, F Strino, B Nadler, Y Kluger Proc. Natl. Acad. Sci. U.S.A. 111 (4), 1253-1258, 2014 | 163 | 2014 |
| TrAp: a Tree Approach for Fingerprinting Subclonal Tumor Composition F Strino, F Parisi, M Micsinai, Y Kluger Nucleic Acids Research 41 (17), e165, 2013 | 145 | 2013 |
| FIREWACh: high-throughput functional detection of transcriptional regulatory modules in mammalian cells M Murtha, Z Tokcaer-Keskin, Z Tang, F Strino, X Chen, Y Wang, X Xi, ... Nature methods 11 (5), 559-565, 2014 | 123 | 2014 |
| SFMBT1 functions with LSD1 to regulate expression of canonical histone genes and chromatin-related factors J Zhang, R Bonasio, F Strino, Y Kluger, JK Holloway, AJ Modzelewski, ... Genes & development 27 (7), 749-766, 2013 | 93 | 2013 |
| Picking ChIP-seq peak detectors for analyzing chromatin modification experiments M Micsinai, F Parisi, F Strino, P Asp, BD Dynlacht, Y Kluger Nucleic acids research 40 (9), e70-e70, 2012 | 89 | 2012 |
| Close proximity to Igh is a contributing factor to AID-mediated translocations PP Rocha, M Micsinai, JHR Kim, SL Hewitt, PP Souza, T Trimarchi, ... Molecular cell 47 (6), 873-885, 2012 | 70 | 2012 |
| IL-7 functionally segregates the pro-B cell stage by regulating transcription of recombination mediators across cell cycle K Johnson, J Chaumeil, M Micsinai, JMH Wang, LB Ramsey, GV Baracho, ... The Journal of Immunology 188 (12), 6084-6092, 2012 | 46 | 2012 |
| The use of a genetic algorithm search for molecular mechanics (MM3)-based conformational analysis of oligosaccharides A Nahmany, F Strino, J Rosen, GJL Kemp, PG Nyholm Carbohydrate research 340 (5), 1059-1064, 2005 | 30 | 2005 |
| Integrated analysis of tumor samples sheds light on tumor heterogeneity F Parisi, M Micsinai, F Strino, S Ariyan, D Narayan, A Bacchiocchi, ... The Yale Journal of Biology and Medicine 85 (3), 347, 2012 | 27 | 2012 |
| Conformation of the exopolysaccharide of Burkholderia cepacia predicted with Molecular Mechanics (MM3) using Genetic Algorithm search F Strino, A Nahmany, J Rosen, GJL Kemp, I Sá-correia, PG Nyholm Carbohydrate research 340 (5), 1019-1024, 2005 | 22 | 2005 |
| Identifying peaks in*-seq data using shape information F Strino, M Lappe BMC bioinformatics 17, 343-361, 2016 | 21 | 2016 |
| Comparative FAIRE-seq analysis reveals distinguishing features of the chromatin structure of ground state-and primed-pluripotent cells M Murtha, F Strino, Z Tokcaer-Keskin, N Sumru Bayin, D Shalabi, X Xi, ... Stem Cells 33 (2), 378-391, 2015 | 20 | 2015 |
| Computational studies on the interaction of ABO-active saccharides with the norovirus VA387 capsid protein can explain experimental binding data CAK Koppisetty, W Nasir, F Strino, GE Rydell, G Larson, PG Nyholm Journal of computer-aided molecular design 24, 423-431, 2010 | 18 | 2010 |
| Conformational analysis of thioglycoside derivatives of histo-blood group ABH antigens using an ab initio-derived reparameterization of MM4: implications for design of non … F Strino, JH Lii, HJ Gabius, PG Nyholm Journal of computer-aided molecular design 23 (12), 845-852, 2009 | 18 | 2009 |
| Selenoglycosides in silico: ab initio-derived reparameterization of MM4, conformational analysis using histo-blood group ABH antigens and lectin docking as indication for … F Strino, JH Lii, CAK Koppisetty, PG Nyholm, HJ Gabius Journal of computer-aided molecular design 24, 1009-1021, 2010 | 17 | 2010 |
| Arpeggio: harmonic compression of ChIP-seq data reveals protein-chromatin interaction signatures KP Stanton, F Parisi, F Strino, N Rabin, P Asp, Y Kluger Nucleic acids research 41 (16), e161-e161, 2013 | 10 | 2013 |
| Gene trajectory inference for single-cell data by optimal transport metrics R Qu, X Cheng, E Sefik, JS Stanley III, B Landa, F Strino, S Platt, ... Nature Biotechnology, 1-11, 2024 | 9 | 2024 |
| VDA, a Method of Choosing a Better Algorithm with Fewer Validations F Strino, F Parisi, Y Kluger PloS one 6 (10), e26074, 2011 | 4 | 2011 |
| Computational analysis of oligosaccharide conformations–methodological development, applied studies, and design of glycomimetics F Strino Institute of Biomedicine. Department of Medical Biochemistry and Cell Biology, 2010 | 1 | 2010 |
Fabio ParisiPostdoctoral Associate, Yale UniversityVerified email at yale.edu
