Ralf Weber
Ralf Weber
Lecturer in Data Science and Computational Metabolomics, University of Birmingham, United Kingdom
Verified email at - Homepage
Cited by
Cited by
Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics
WB Dunn, A Erban, RJM Weber, DJ Creek, M Brown, R Breitling, ...
Metabolomics 9, 44-66, 2013
Non-targeted UHPLC-MS metabolomic data processing methods: a comparative investigation of normalisation, missing value imputation, transformation and scaling
R Di Guida, J Engel, JW Allwood, RJM Weber, MR Jones, U Sommer, ...
Metabolomics 12, 1-14, 2016
A new approach to toxicity testing in Daphnia magna: application of high throughput FT-ICR mass spectrometry metabolomics
NS Taylor, RJM Weber, AD Southam, TG Payne, O Hrydziuszko, ...
Metabolomics 5 (1), 44-58, 2009
A complete workflow for high-resolution spectral-stitching nanoelectrospray direct-infusion mass-spectrometry-based metabolomics and lipidomics
AD Southam, RJM Weber, J Engel, MR Jones, MR Viant
Nature protocols 12 (2), 310-328, 2017
Direct infusion mass spectrometry metabolomics dataset: a benchmark for data processing and quality control
JA Kirwan, RJM Weber, DI Broadhurst, MR Viant
Scientific data 1 (1), 1-13, 2014
Use cases, best practice and reporting standards for metabolomics in regulatory toxicology
MR Viant, TMD Ebbels, RD Beger, DR Ekman, DJT Epps, H Kamp, ...
Nature communications 10 (1), 3041, 2019
Characterization of isotopic abundance measurements in high resolution FT-ICR and Orbitrap mass spectra for improved confidence of metabolite identification
RJM Weber, AD Southam, U Sommer, MR Viant
Analytical chemistry 83 (10), 3737-3743, 2011
Applying'omics technologies in chemicals risk assessment: Report of an ECETOC workshop
R Buesen, BN Chorley, B da Silva Lima, G Daston, L Deferme, T Ebbels, ...
Regulatory Toxicology and Pharmacology 91, S3-S13, 2017
MI-Pack: Increased confidence of metabolite identification in mass spectra by integrating accurate masses and metabolic pathways
RJM Weber, MR Viant
Chemometrics and Intelligent Laboratory Systems 104 (1), 75-82, 2010
Galaxy-M: A Galaxy workflow for processing and analyzing direct infusion and liquid chromatography mass spectrometry-based metabolomics data
RL Davidson, RJM Weber, H Liu, A Sharma-Oates, MR Viant
GigaScience 5 (1), s13742-016-0115-8, 2016
Characterisation of iron-rich atmospheric submicrometre particles in the roadside environment
P Sanderson, SS Su, ITH Chang, JMD Saborit, DM Kepaptsoglou, ...
Atmospheric environment 140, 167-175, 2016
Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy
RJM Weber, TN Lawson, RM Salek, TMD Ebbels, RC Glen, R Goodacre, ...
Metabolomics 13, 1-5, 2017
Community detection in social and biological networks using differential evolution
G Jia, Z Cai, M Musolesi, Y Wang, DA Tennant, RJM Weber, JK Heath, ...
International Conference on Learning and Intelligent Optimization, 71-85, 2012
Discriminating between different acute chemical toxicities via changes in the daphnid metabolome
NS Taylor, RJM Weber, TA White, MR Viant
Toxicological Sciences 118 (1), 307-317, 2010
Exo-Metabolome of Pseudovibrio sp. FO-BEG1 Analyzed by Ultra-High Resolution Mass Spectrometry and the Effect of Phosphate Limitation
S Romano, T Dittmar, V Bondarev, RJM Weber, MR Viant, ...
PloS one 9 (5), e96038, 2014
The metaRbolomics Toolbox in Bioconductor and beyond
J Stanstrup, CD Broeckling, R Helmus, N Hoffmann, E Mathé, T Naake, ...
Metabolites 9 (10), 200, 2019
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
E Afgan, A Nekrutenko, BA Grüning, D Blankenberg, J Goecks, ...
Nucleic acids research, 2022
PhenoMeNal: processing and analysis of metabolomics data in the cloud
K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ...
Gigascience 8 (2), giy149, 2019
Protein Corona Modulates Uptake and Toxicity of Nanoceria via Clathrin-Mediated Endocytosis
J Mazzolini, RJM Weber, HS Chen, A Khan, E Guggenheim, RK Shaw, ...
The Biological Bulletin 231 (1), 40-60, 2016
msPurity: automated evaluation of precursor ion purity for mass spectrometry-based fragmentation in metabolomics
TN Lawson, RJM Weber, MR Jones, AJ Chetwynd, G Rodrı́guez-Blanco, ...
Analytical chemistry 89 (4), 2432-2439, 2017
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