Huaiyu Mi
Huaiyu Mi
Verified email at usc.edu
Title
Cited by
Cited by
Year
The sequence of the human genome
JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, ...
science 291 (5507), 1304-1351, 2001
182182001
PANTHER: a library of protein families and subfamilies indexed by function
PD Thomas, MJ Campbell, A Kejariwal, H Mi, B Karlak, R Daverman, ...
Genome research 13 (9), 2129-2141, 2003
27932003
Large-scale gene function analysis with the PANTHER classification system
H Mi, A Muruganujan, JT Casagrande, PD Thomas
Nature protocols 8 (8), 1551-1566, 2013
20812013
PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements
H Mi, X Huang, A Muruganujan, H Tang, C Mills, D Kang, PD Thomas
Nucleic acids research 45 (D1), D183-D189, 2017
18612017
The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
17492019
PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees
H Mi, A Muruganujan, PD Thomas
Nucleic acids research 41 (D1), D377-D386, 2012
15502012
PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
H Mi, A Muruganujan, D Ebert, X Huang, PD Thomas
Nucleic acids research 47 (D1), D419-D426, 2019
12902019
InterPro in 2017—beyond protein family and domain annotations
RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ...
Nucleic acids research 45 (D1), D190-D199, 2017
12182017
The InterPro protein families database: the classification resource after 15 years
A Mitchell, HY Chang, L Daugherty, M Fraser, S Hunter, R Lopez, ...
Nucleic acids research 43 (D1), D213-D221, 2015
12132015
InterPro in 2011: new developments in the family and domain prediction database
S Hunter, P Jones, A Mitchell, R Apweiler, TK Attwood, A Bateman, ...
Nucleic acids research 40 (D1), D306-D312, 2012
11662012
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
AL Mitchell, TK Attwood, PC Babbitt, M Blum, P Bork, A Bridge, SD Brown, ...
Nucleic acids research 47 (D1), D351-D360, 2019
9432019
The systems biology graphical notation
N Le Novere, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ...
Nature biotechnology 27 (8), 735-741, 2009
8962009
The PANTHER database of protein families, subfamilies, functions and pathways
H Mi, B Lazareva-Ulitsky, R Loo, A Kejariwal, J Vandergriff, S Rabkin, ...
Nucleic acids research 33 (suppl_1), D284-D288, 2005
8702005
PANTHER version 10: expanded protein families and functions, and analysis tools
H Mi, S Poudel, A Muruganujan, JT Casagrande, PD Thomas
Nucleic acids research 44 (D1), D336-D342, 2016
8122016
The BioPAX community standard for pathway data sharing
E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ...
Nature biotechnology 28 (9), 935-942, 2010
6592010
PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification
PD Thomas, A Kejariwal, MJ Campbell, H Mi, K Diemer, N Guo, I Ladunga, ...
Nucleic acids research 31 (1), 334-341, 2003
6502003
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
H Mi, Q Dong, A Muruganujan, P Gaudet, S Lewis, PD Thomas
Nucleic acids research 38 (suppl_1), D204-D210, 2010
6042010
Applications for protein sequence–function evolution data: mRNA/protein expression analysis and coding SNP scoring tools
PD Thomas, A Kejariwal, N Guo, H Mi, MJ Campbell, A Muruganujan, ...
Nucleic acids research 34 (suppl_2), W645-W650, 2006
5182006
Protocol Update for large-scale genome and gene function analysis with the PANTHER classification system (v. 14.0)
H Mi, A Muruganujan, X Huang, D Ebert, C Mills, X Guo, PD Thomas
Nature protocols 14 (3), 703-721, 2019
4872019
PANTHER pathway: an ontology-based pathway database coupled with data analysis tools
H Mi, P Thomas
Protein Networks and Pathway Analysis, 123-140, 2009
4232009
The system can't perform the operation now. Try again later.
Articles 1–20