des higgins

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	All	Since 2016
Citations	188485	45435
h-index	67	40
i10-index	135	95

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Iain WallaceCelgeneVerified email at celgene.com
Andreas WilmMicrosoftVerified email at microsoft.com
Gordon BlackshieldsMMUHVerified email at mater.ie
Cedric NotredamePrincipal Investigator, Centre For Genomic Regulation CRG, BarcelonaVerified email at crg.eu
Rodrigo LopezHead of Web Production. EMBL-EBIVerified email at ebi.ac.uk
Paul M. SharpProfessor of Genetics, University of EdinburghVerified email at ed.ac.uk
Hamish McWilliamRobert Gordon UniversityVerified email at bioinfo-user.org.uk
Aedin CulhaneDept of Data Science, Dana-Farber Cancer Institute/ Dept of Biostatistics, Harvard TH Chan SchoolVerified email at ds.dfci.harvard.edu
David G DineenPostdoctoral researcher, UC BerkeleyVerified email at ucd.ie
Nigel BrownCEITEC, Masaryk University, Brno, Czech RepublicVerified email at ceitec.muni.cz
Jaap HeringaProfessor of Bioinformatics, Vrije Universiteit AmsterdamVerified email at vu.nl
Denis ShieldsProfessor of Clinical Bioinformatics, University College DublinVerified email at ucd.ie
Kevin KarplusProfessor of Biomolecular Engineering, University of California, Santa CruzVerified email at soe.ucsc.edu
Johannes SödingMax-Planck-Institute for Biophysical Chemistry, GöttingenVerified email at mpibpc.mpg.de
Weizhong LiZhongshan School of Medicine, Sun Yat-sen UniversityVerified email at mail.sysu.edu.cn
Geraldine ButlerUniversity College DublinVerified email at ucd.ie
Manolo GouyLaboratory of Biometry and Evolutionary Biology, CNRS, LyonVerified email at univ-lyon1.fr
Weifeng ShiShandong First Medical UniversityVerified email at ioz.ac.cn
Professor William M. GallagherUCD Conway Institute, University College DublinVerified email at ucd.ie
Dr. Chao-Dong Zhu（朱朝东）Division of Functional Insect Groups Evolution, Institute of Zoology, Chinese Academy ofVerified email at ioz.ac.cn

des higgins

University College Dublin

Verified email at ucd.ie - Homepage

Evolution Bioinformatics Sequence Alignment Genomics


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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice JD Thompson, DG Higgins, TJ Gibson Nucleic acids research 22 (22), 4673, 1994	65916	1994
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools JD Thompson, TJ Gibson, F Plewniak, F Jeanmougin, DG Higgins Nucleic acids research 25 (24), 4876-4882, 1997	42625	1997
Clustal W and Clustal X version 2.0 MA Larkin, G Blackshields, NP Brown, R Chenna, PA McGettigan, ... bioinformatics 23 (21), 2947-2948, 2007	26501	2007
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega F Sievers, A Wilm, D Dineen, TJ Gibson, K Karplus, W Li, R Lopez, ... Molecular systems biology 7 (1), 539, 2011	9730	2011
T-Coffee: A novel method for fast and accurate multiple sequence alignment C Notredame, DG Higgins, J Heringa Journal of molecular biology 302 (1), 205-217, 2000	7276	2000
Multiple sequence alignment with the Clustal series of programs R Chenna, H Sugawara, T Koike, R Lopez, TJ Gibson, DG Higgins, ... Nucleic acids research 31 (13), 3497-3500, 2003	5396	2003
CLUSTAL: a package for performing multiple sequence alignment on a microcomputer DG Higgins, PM Sharp Gene 73 (1), 237-244, 1988	3989	1988
CLUSTAL V: improved software for multiple sequence alignment DG Higgins, AJ Bleasby, R Fuchs Computer applications in the biosciences: CABIOS 8 (2), 189, 1992	3043	1992
Multiple sequence alignment with Clustal X F Jeanmougin, JD Thompson, M Gouy, DG Higgins, TJ Gibson Trends in biochemical sciences 23 (10), 403-405, 1998	2987	1998
Multiple sequence alignment using ClustalW and ClustalX JD Thompson, TJ Gibson, DG Higgins Current protocols in bioinformatics, 2.3. 1-2.3. 22, 2003	2102	2003
Fast and sensitive multiple sequence alignments on a microcomputer DG Higgins, PM Sharp Computer applications in the biosciences: CABIOS 5 (2), 151-153, 1989	1896	1989
[22] Using CLUSTAL for multiple sequence alignments DG Higgins, JD Thompson, TJ Gibson Methods in enzymology 266, 383-402, 1996	1873	1996
Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice JD Thompson Nucleic Acids Res 22, 4673-4680, 1994	1373	1994
SAGA: sequence alignment by genetic algorithm C Notredame, DG Higgins Nucleic acids research 24 (8), 1515-1524, 1996	699	1996
Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the … PM Sharp, E Cowe, DG Higgins, DC Shields, KH Wolfe, F Wright Nucleic acids research 16 (17), 8207-8211, 1988	693	1988
" Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. DC Shields, PM Sharp, DG Higgins, F Wright Molecular biology and evolution 5 (6), 704-716, 1988	580	1988
M-Coffee: combining multiple sequence alignment methods with T-Coffee IM Wallace, O O'sullivan, DG Higgins, C Notredame Nucleic acids research 34 (6), 1692-1699, 2006	538	2006
Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data IB Jeffery, DG Higgins, AC Culhane BMC bioinformatics 7 (1), 1-16, 2006	474	2006
Clustal Omega for making accurate alignments of many protein sequences F Sievers, DG Higgins Protein Science 27 (1), 135-145, 2018	435	2018
Finding flexible patterns in unaligned protein sequences I Jonassen, JF Collins, DG Higgins Protein science 4 (8), 1587-1595, 1995	406	1995

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