Yousef Jamali
Cited by
Cited by
Nuclear pore complex: biochemistry and biophysics of nucleocytoplasmic transport in health and disease
T Jamali, Y Jamali, M Mehrbod, MRK Mofrad
International review of cell and molecular biology 287, 233-286, 2011
Brownian dynamics simulation of nucleocytoplasmic transport: a coarse-grained model for the functional state of the nuclear pore complex
R Moussavi-Baygi, Y Jamali, R Karimi, MRK Mofrad
PLoS computational biology 7 (6), 2011
A sub-cellular viscoelastic model for cell population mechanics
Y Jamali, M Azimi, MRK Mofrad
PLoS One 5 (8), 2010
Biophysical coarse-grained modeling provides insights into transport through the nuclear pore complex
R Moussavi-Baygi, Y Jamali, R Karimi, MRK Mofrad
Biophysical journal 100 (6), 1410-1419, 2011
An agent based model of integrin clustering: Exploring the role of ligand clustering, integrin homo-oligomerization, integrin–ligand affinity, membrane crowdedness and ligand …
Y Jamali, T Jamali, MRK Mofrad
Journal of Computational Physics 244, 264-278, 2013
Influence of Global and Local Membrane Curvature on Mechanosensitive Ion Channels: A Finite Element Approach
O Bavi, CD Cox, M Vossoughi, R Naghdabadi, Y Jamali, B Martinac
Membranes 6 (1), 2016
Accounting for diffusion in agent based models of reaction-diffusion systems with application to cytoskeletal diffusion
M Azimi, Y Jamali, MRK Mofrad
PLoS One 6 (9), 2011
Computational modelling of the stochastic dynamics of kinesin biomolecular motors
Y Jamali, A Lohrasebi, H Rafii-Tabar
Physica A: Statistical Mechanics and its Applications 381, 239-254, 2007
WCOACH: Protein complex prediction in weighted PPI networks
M Kouhsar, F Zare-Mirakabad, Y Jamali
Genes & genetic systems, 15-00032, 2016
The concepts and applications of fractional order differential calculus in modeling of viscoelastic systems: A primer
MA Matlob, Y Jamali
Critical Reviews™ in Biomedical Engineering 47 (4), 2019
The combined effect of hydrophobic mismatch and bilayer local bending on the regulation of mechanosensitive ion channels
O Bavi, M Vossoughi, R Naghdabadi, Y Jamali
PloS one 11 (3), 2016
Computational modeling of a rotary nanopump
A Lohrasebi, Y Jamali
Journal of Molecular Graphics and Modelling 29 (8), 1025-1029, 2011
The effect of local bending on gating of MscL using a representative volume element and finite element simulation
O Bavi, M Vossoughi, R Naghdabadi, Y Jamali
Channels 8 (4), 344-349, 2014
Nanomechanical properties of MscL alpha helices: A steered molecular dynamics study
YJ N. Bavi, O. Bavi, M. Vossoughi, R. Naghdabadi, A.P. Hill, B. Martinac
Channels, 2016
Modeling the effect of external electric field and current on the stochastic dynamics of ATPase nano-biomolecular motors
A Lohrasebi, Y Jamali, H Rafii-Tabar
Physica A: Statistical Mechanics and its Applications 387 (22), 5466-5476, 2008
Modeling ion permeation through a bacterial voltage-gated calcium channel Ca V Ab using molecular dynamics simulations
J Adiban, Y Jamali, H Rafii-Tabar
Molecular BioSystems 13 (1), 208-214, 2017
Multi-scale simulation of carbon nanotubes interactions with cell membrane: DFT calculations and molecular dynamic simulation
SH Tabari, Y Jamali, R Poursalehi
Procedia Materials Science 11, 423-427, 2015
T Jamali, Y Jamali, M Mehrbod
RK Mofrad,“Nuclear pore complex: biochemistry and biophysics of …, 2011
Computational modeling of the collective stochastic motion of kinesin nano motors
Y Jamali, ME Foulaadvand, H Rafii-Tabar
Journal of Computational and Theoretical Nanoscience 7 (1), 146-152, 2010
Structural and functional effect of an oscillating electric field on the Dopamine-D3 receptor: A molecular dynamics simulation study
Z Fallah, Y Jamali, H Rafii-Tabar
PloS one 11 (11), 2016
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