Yousef Jamali
Title
Cited by
Cited by
Year
Nuclear pore complex: biochemistry and biophysics of nucleocytoplasmic transport in health and disease
T Jamali, Y Jamali, M Mehrbod, MRK Mofrad
International review of cell and molecular biology 287, 233-286, 2011
962011
Brownian dynamics simulation of nucleocytoplasmic transport: a coarse-grained model for the functional state of the nuclear pore complex
R Moussavi-Baygi, Y Jamali, R Karimi, MRK Mofrad
PLoS Comput Biol 7 (6), e1002049, 2011
722011
A sub-cellular viscoelastic model for cell population mechanics
Y Jamali, M Azimi, MRK Mofrad
PLoS One 5 (8), e12097, 2010
682010
Influence of Global and Local Membrane Curvature on Mechanosensitive Ion Channels: A Finite Element Approach
O Bavi, CD Cox, M Vossoughi, R Naghdabadi, Y Jamali, B Martinac
Membranes 6 (1), 2016
472016
The concepts and applications of fractional order differential calculus in modeling of viscoelastic systems: a primer
MA Matlob, Y Jamali
Critical Reviews™ in Biomedical Engineering 47 (4), 2019
452019
Biophysical coarse-grained modeling provides insights into transport through the nuclear pore complex
R Moussavi-Baygi, Y Jamali, R Karimi, MRK Mofrad
Biophysical journal 100 (6), 1410-1419, 2011
432011
An agent based model of integrin clustering: Exploring the role of ligand clustering, integrin homo-oligomerization, integrin–ligand affinity, membrane crowdedness and ligand …
Y Jamali, T Jamali, MRK Mofrad
Journal of Computational Physics 244, 264-278, 2013
332013
WCOACH: Protein complex prediction in weighted PPI networks
M Kouhsar, F Zare-Mirakabad, Y Jamali
Genes & genetic systems, 15-00032, 2016
272016
Accounting for diffusion in agent based models of reaction-diffusion systems with application to cytoskeletal diffusion
M Azimi, Y Jamali, MRK Mofrad
PLoS One 6 (9), e25306, 2011
272011
Computational modelling of the stochastic dynamics of kinesin biomolecular motors
Y Jamali, A Lohrasebi, H Rafii-Tabar
Physica A: Statistical Mechanics and its Applications 381, 239-254, 2007
272007
The combined effect of hydrophobic mismatch and bilayer local bending on the regulation of mechanosensitive ion channels
O Bavi, M Vossoughi, R Naghdabadi, Y Jamali
PloS one 11 (3), e0150578, 2016
232016
Nanomechanical properties of MscL alpha helices: A steered molecular dynamics study
YJ N. Bavi, O. Bavi, M. Vossoughi, R. Naghdabadi, A.P. Hill, B. Martinac
Channels 11 (3), 209-223, 2017
172017
The effect of local bending on gating of MscL using a representative volume element and finite element simulation
O Bavi, M Vossoughi, R Naghdabadi, Y Jamali
Channels 8 (4), 344-349, 2014
162014
Computational modeling of a rotary nanopump
A Lohrasebi, Y Jamali
Journal of Molecular Graphics and Modelling 29 (8), 1025-1029, 2011
162011
Modeling the effect of external electric field and current on the stochastic dynamics of ATPase nano-biomolecular motors
A Lohrasebi, Y Jamali, H Rafii-Tabar
Physica A: Statistical Mechanics and its Applications 387 (22), 5466-5476, 2008
112008
Modeling ion permeation through a bacterial voltage-gated calcium channel Ca V Ab using molecular dynamics simulations
J Adiban, Y Jamali, H Rafii-Tabar
Molecular BioSystems 13 (1), 208-214, 2017
72017
Multi-scale simulation of carbon nanotubes interactions with cell membrane: DFT calculations and molecular dynamic simulation
SH Tabari, Y Jamali, R Poursalehi
Procedia Materials Science 11, 423-427, 2015
72015
Structural and functional effect of an oscillating electric field on the Dopamine-D3 receptor: A molecular dynamics simulation study
Z Fallah, Y Jamali, H Rafii-Tabar
PloS one 11 (11), e0166412, 2016
52016
A proposed mechanism for mind-brain interaction using extended Bohmian quantum mechanics in Avicenna's monotheistic perspective
M Jamali, M Golshani, Y Jamali
Heliyon 5 (7), e02130, 2019
32019
On the influence of structural connectivity on the correlation patterns and network synchronization
PS Nazemi, Y Jamali
Frontiers in computational neuroscience 12, 105, 2019
32019
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Articles 1–20