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Yiling Chen
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An atlas of alternative polyadenylation quantitative trait loci contributing to complex trait and disease heritability
L Li, KL Huang, Y Gao, Y Cui, G Wang, ND Elrod, Y Li, YE Chen, P Ji, ...
Nature genetics 53 (7), 994-1005, 2021
1052021
The concurrence of DNA methylation and demethylation is associated with transcription regulation
J Shi, J Xu, YE Chen, JS Li, Y Cui, L Shen, JJ Li, W Li
Nature communications 12 (1), 5285, 2021
402021
DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features
J Lyu, JJ Li, J Su, F Peng, YE Chen, X Ge, W Li
Science advances 6 (46), eaba6784, 2020
372020
Clipper: p-value-free FDR control on high-throughput data from two conditions
X Ge, YE Chen, D Song, ML McDermott, K Woyshner, A Manousopoulou, ...
Genome biology 22, 1-29, 2021
352021
TROM: A testing-based method for finding transcriptomic similarity of biological samples
WV Li, Y Chen, JJ Li
Statistics in biosciences 9, 105-136, 2017
222017
A flexible model-free prediction-based framework for feature ranking
JJ Li, YE Chen, X Tong
Journal of Machine Learning Research 22 (124), 1-54, 2021
52021
Information-theoretic classification accuracy: a criterion that guides data-driven combination of ambiguous outcome labels in multi-class classification
C Zhang, YE Chen, S Zhang, JJ Li
Journal of machine learning research 23 (341), 1-65, 2022
32022
APIR: Aggregating Universal Proteomics Database Search Algorithms for Peptide Identification with FDR Control
YE Chen, X Ge, K Woyshner, ML McDermott, A Manousopoulou, ...
bioRxiv, 2021.09. 08.459494, 2021
2021
Neyman-Pearson Criterion (NPC): A Model Selection Criterion for Asymmetric Binary Classification
JJ Li
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Articles 1–9