Daniel Jeffares

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David PennyProfessor of theoretical Biology, Massey UniversityVerified email at massey.ac.nz
Jürg BählerProfessor of Systems Biology, University College LondonVerified email at ucl.ac.uk
Anthony M PooleSchool of Biological Sciences, University of Auckland, New ZealandVerified email at auckland.ac.nz
Charalampos (Babis) RallisUniversity of EssexVerified email at essex.ac.uk
arnab painProfessor, KAUST; Distinguished Professor, Hokkaido UniversityVerified email at kaust.edu.sa
Matthew BerrimanWellcome Sanger InstituteVerified email at sanger.ac.uk
Sakari KauppinenProfessor, Center for RNA Medicine, Aalborg UniversityVerified email at dcm.aau.dk
Fritz J SedlazeckHuman Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston TX 77030Verified email at bcm.edu
Emmanouil Dermitzakis, Manolis Der...VP Computational Biology, GSKVerified email at gsk.com
Sarah ForresterUniversity of YorkVerified email at york.ac.uk
Marc HoeppnerHead of bioinformatics, Department of Clinical Molecular Biology, Kiel UniversityVerified email at ikmb.uni-kiel.de
Christophe DessimozProf at UNIL and Joint Executive Director of SIBVerified email at unil.ch
Chris PenkettSenior Developer, University of CambridgeVerified email at cam.ac.uk
Danny Asher BittonUCLVerified email at ucl.ac.uk
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
Jeremy C. MottramProfessor in Pathogen BiologyVerified email at York.ac.uk
Doug SpeedAarhus UniversityVerified email at qgg.au.dk
Francois BallouxUCL Genetics Institute; University College LondonVerified email at ucl.ac.uk
Liam P. ShawUniversity of OxfordVerified email at zoo.ox.ac.uk
Samuel MargueratTeam Lead in Genomics, UCL Cancer InstituteVerified email at ucl.ac.uk

Daniel Jeffares

Lecturer, Department of Biology, University of York

Verified email at york.ac.uk - Homepage

Population genomics genome evolution fission yeast parasite evolution


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Comparative genomic analysis of three Leishmania species that cause diverse human disease CS Peacock, K Seeger, D Harris, L Murphy, JC Ruiz, MA Quail, N Peters, ... Nature genetics 39 (7), 839-847, 2007	880	2007
The path from the RNA world AM Poole, DC Jeffares, D Penny Journal of Molecular Evolution 46 (1), 1-17, 1998	323	1998
Relics from the RNA world DC Jeffares, AM Poole, D Penny Journal of molecular evolution 46 (1), 18-36, 1998	314	1998
The biology of intron gain and loss DC Jeffares, T Mourier, D Penny TRENDS in Genetics 22 (1), 16-22, 2006	289	2006
Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast DC Jeffares, C Jolly, M Hoti, D Speed, L Shaw, C Rallis, F Balloux, ... Nature communications 8 (1), 1-11, 2017	275	2017
Rapidly regulated genes are intron poor DC Jeffares, CJ Penkett, J Bähler Trends in genetics 24 (8), 375-378, 2008	272	2008
Genome variation and evolution of the malaria parasite Plasmodium falciparum DC Jeffares, A Pain, A Berry, AV Cox, J Stalker, CE Ingle, A Thomas, ... Nature genetics 39 (1), 120-125, 2007	241	2007
Eukaryotic intron loss T Mourier, DC Jeffares Science 300 (5624), 1393-1393, 2003	226	2003
Early evolution: prokaryotes, the new kids on the block A Poole, D Jeffares, D Penny Bioessays 21 (10), 880-889, 1999	195	1999
The genomic and phenotypic diversity of Schizosaccharomyces pombe DC Jeffares, C Rallis, A Rieux, D Speed, M Převorovský, T Mourier, ... Nature genetics 47 (3), 235-241, 2015	146	2015
Oligonucleotides useful for detecting and analyzing nucleic acids of interest S Kauppinen, C Alsbo, P Nielsen, D Jeffares, T Mourier, S Mork, ... US Patent App. 10/690,487, 2004	124	2004
Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum T Mourier, C Carret, S Kyes, Z Christodoulou, PP Gardner, DC Jeffares, ... Genome research 18 (2), 281-292, 2008	106	2008
A beginners guide to estimating the non-synonymous to synonymous rate ratio of all protein-coding genes in a genome DC Jeffares, B Tomiczek, V Sojo, M Reis Parasite genomics protocols, 65-90, 2015	89	2015
Selected Schizosaccharomyces pombe Strains Have Characteristics That Are Beneficial for Winemaking Á Benito, D Jeffares, F Palomero, F Calderón, FY Bai, J Bähler, S Benito PloS one 11 (3), e0151102, 2016	79	2016
PCR amplification of the fas‐1 gene for the detection of virulent strains of Rhodococcus fascians RR Stange, D Jeffares, C Young, DB Scott, JR Eason, PE Jameson Plant Pathology 45 (3), 407-417, 1996	65	1996
LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq DA Bitton, C Rallis, DC Jeffares, GC Smith, YYC Chen, S Codlin, ... Genome research 24 (7), 1169-1179, 2014	64	2014
Evolutionarily stable association of intronic snoRNAs and microRNAs with their host genes MP Hoeppner, S White, DC Jeffares, AM Poole Genome biology and evolution 1, 420-428, 2009	55	2009
An overview of the introns-first theory D Penny, MP Hoeppner, AM Poole, DC Jeffares Journal of molecular evolution 69 (5), 527-540, 2009	52	2009
Direct isolation of poly(A)⁺ RNA from 4 M guanidine thiocyanate‐lysed cell extracts using locked nucleic acid‐oligo(T) capture N Jacobsen, PS Nielsen, DC Jeffares, J Eriksen, H Ohlsson, P Arctander, ... Nucleic Acids Research 32 (7), e64-e64, 2004	47	2004
Diversification of genes encoding mei2-like RNA binding proteins in plants GH Anderson, NDG Alvarez, C Gilman, DC Jeffares, VCW Trainor, ... Plant molecular biology 54 (5), 653-670, 2004	46	2004

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