Daniel Jeffares

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David PennyProfessor of theoretical Biology, Massey UniversityVerified email at massey.ac.nz
Anthony M PooleSchool of Biological Sciences, University of Auckland, New ZealandVerified email at auckland.ac.nz
Jürg BählerProfessor of Systems Biology, University College LondonVerified email at ucl.ac.uk
arnab painProfessor, KAUST; Distinguished Professor, Hokkaido UniversityVerified email at kaust.edu.sa
Emmanouil Dermitzakis, Manolis Der...Prof of Genetics, University of Geneva Medical School / Director, Health 2030 Genome CenterVerified email at unige.ch
Fritz J SedlazeckHuman Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston TX 77030Verified email at cshl.edu
Marc HoeppnerHead of bioinformatics, Department of Clinical Molecular Biology, Kiel UniversityVerified email at ikmb.uni-kiel.de
Danny Asher BittonUCLVerified email at ucl.ac.uk
Doug SpeedAarhus UniversityVerified email at qgg.au.dk
Francois BallouxUCL Genetics Institute; University College LondonVerified email at ucl.ac.uk
Christophe DessimozSNSF Professor at UNIL, Professor at UCLVerified email at ucl.ac.uk
Paul P. GardnerUniversity of Otago, New ZealandVerified email at otago.ac.nz
Samuel MargueratGroup head, MRC London Institute of Medical Sciences, Imperial College LondonVerified email at lms.mrc.ac.uk
Andrew BerryWellcome Trust Sanger Institute, HAVANA groupVerified email at sanger.ac.uk
Anne-Catrin UhlemannColumbia University Medical CenterVerified email at columbia.edu
Sanjeev KrishnaProfessor of Molecular Parasitology and Medicine, St George's University of LondonVerified email at sgul.ac.uk
Liam P. ShawUniversity of OxfordVerified email at zoo.ox.ac.uk
sandra codlinVerified email at ucl.ac.uk
Sam Griffiths-JonesFaculty of Biology, Medicine and Health. University of ManchesterVerified email at manchester.ac.uk
Quan LongUniversity of CalgaryVerified email at ucalgary.ca

Daniel Jeffares

Lecturer, Department of Biology, University of York

Verified email at york.ac.uk - Homepage

Population genomics genome evolution fission yeast parasite evolution


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Comparative genomic analysis of three Leishmania species that cause diverse human disease CS Peacock, K Seeger, D Harris, L Murphy, JC Ruiz, MA Quail, N Peters, ... Nature genetics 39 (7), 839-847, 2007	806	2007
The path from the RNA world AM Poole, DC Jeffares, D Penny Journal of Molecular Evolution 46 (1), 1-17, 1998	310	1998
Relics from the RNA world DC Jeffares, AM Poole, D Penny Journal of molecular evolution 46 (1), 18-36, 1998	305	1998
The biology of intron gain and loss DC Jeffares, T Mourier, D Penny TRENDS in Genetics 22 (1), 16-22, 2006	276	2006
Genome variation and evolution of the malaria parasite Plasmodium falciparum DC Jeffares, A Pain, A Berry, AV Cox, J Stalker, CE Ingle, A Thomas, ... Nature genetics 39 (1), 120-125, 2007	234	2007
Rapidly regulated genes are intron poor DC Jeffares, CJ Penkett, J Bähler Trends in genetics 24 (8), 375-378, 2008	220	2008
Eukaryotic intron loss T Mourier, DC Jeffares Science 300 (5624), 1393-1393, 2003	216	2003
Early evolution: prokaryotes, the new kids on the block A Poole, D Jeffares, D Penny Bioessays 21 (10), 880-889, 1999	187	1999
Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast DC Jeffares, C Jolly, M Hoti, D Speed, L Shaw, C Rallis, F Balloux, ... Nature communications 8 (1), 1-11, 2017	172	2017
The genomic and phenotypic diversity of Schizosaccharomyces pombe DC Jeffares, C Rallis, A Rieux, D Speed, M Převorovský, T Mourier, ... Nature genetics 47 (3), 235-241, 2015	131	2015
Oligonucleotides useful for detecting and analyzing nucleic acids of interest S Kauppinen, C Alsbo, P Nielsen, D Jeffares, T Mourier, S Mork, ... US Patent App. 10/690,487, 2004	114	2004
Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum T Mourier, C Carret, S Kyes, Z Christodoulou, PP Gardner, DC Jeffares, ... Genome research 18 (2), 281-292, 2008	103	2008
A beginners guide to estimating the non-synonymous to synonymous rate ratio of all protein-coding genes in a genome DC Jeffares, B Tomiczek, V Sojo, M dos Reis Parasite Genomics Protocols, 65-90, 2015	69	2015
Selected Schizosaccharomyces pombe Strains Have Characteristics That Are Beneficial for Winemaking Á Benito, D Jeffares, F Palomero, F Calderón, FY Bai, J Bähler, S Benito PloS one 11 (3), e0151102, 2016	64	2016
PCR amplification of the fas‐1 gene for the detection of virulent strains of Rhodococcus fascians RR Stange, D Jeffares, C Young, DB Scott, JR Eason, PE Jameson Plant Pathology 45 (3), 407-417, 1996	62	1996
LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq DA Bitton, C Rallis, DC Jeffares, GC Smith, YYC Chen, S Codlin, ... Genome research 24 (7), 1169-1179, 2014	58	2014
Evolutionarily stable association of intronic snoRNAs and microRNAs with their host genes MP Hoeppner, S White, DC Jeffares, AM Poole Genome biology and evolution 1, 420-428, 2009	52	2009
An overview of the introns-first theory D Penny, MP Hoeppner, AM Poole, DC Jeffares Journal of molecular evolution 69 (5), 527-540, 2009	48	2009
Direct isolation of poly(A)⁺ RNA from 4 M guanidine thiocyanate‐lysed cell extracts using locked nucleic acid‐oligo(T) capture N Jacobsen, PS Nielsen, DC Jeffares, J Eriksen, H Ohlsson, P Arctander, ... Nucleic acids research 32 (7), e64-e64, 2004	47	2004
Diversification of genes encoding mei2-like RNA binding proteins in plants GH Anderson, NDG Alvarez, C Gilman, DC Jeffares, VCW Trainor, ... Plant molecular biology 54 (5), 653-670, 2004	43	2004

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