| Hormone symphony during root growth and development A Garay‐Arroyo, M De La Paz Sánchez, B García‐Ponce, E Azpeitia, ... Developmental dynamics 241 (12), 1867-1885, 2012 | 108 | 2012 |
| From ABC genes to regulatory networks, epigenetic landscapes and flower morphogenesis: making biological sense of theoretical approaches ER Alvarez-Buylla, E Azpeitia, R Barrio, M Benítez, P Padilla-Longoria Seminars in cell & developmental biology 21 (1), 108-117, 2010 | 81 | 2010 |
| XAANTAL2 (AGL14) is an important component of the complex gene regulatory network that underlies Arabidopsis shoot apical meristem transitions RV Pérez-Ruiz, B García-Ponce, N Marsch-Martínez, ... Molecular plant 8 (5), 796-813, 2015 | 66 | 2015 |
| Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche E Azpeitia, M Benítez, I Vega, C Villarreal, ER Alvarez-Buylla BMC systems biology 4, 1-19, 2010 | 65 | 2010 |
| Cell Patterns Emerge from Coupled Chemical and Physical Fields with Cell Proliferation Dynamics: The Arabidopsis thaliana Root as a Study System RA Barrio, JR Romero-Arias, MA Noguez, E Azpeitia, E Ortiz-Gutiérrez, ... PLoS computational biology 9 (5), e1003026, 2013 | 55 | 2013 |
| Finding Missing Interactions of the Arabidopsis thaliana Root Stem Cell Niche Gene Regulatory Network E Azpeitia, N Weinstein, M Benítez, L Mendoza, ER Alvarez-Buylla Frontiers in plant science 4, 110, 2013 | 50 | 2013 |
| Gene regulatory network models for floral organ determination E Azpeitia, J Davila-Velderrain, C Villarreal, ER Alvarez-Buylla Flower development: Methods and protocols, 441-469, 2014 | 49* | 2014 |
| " Antelope": a hybrid-logic model checker for branching-time Boolean GRN analysis G Arellano, J Argil, E Azpeitia, M Benítez, M Carrillo, P Góngora, ... BMC bioinformatics 12, 1-15, 2011 | 49 | 2011 |
| A dynamic genetic-hormonal regulatory network model explains multiple cellular behaviors of the root apical meristem of Arabidopsis thaliana ML García-Gómez, E Azpeitia, ER Álvarez-Buylla PLoS computational biology 13 (4), e1005488, 2017 | 47 | 2017 |
| A Dynamic Gene Regulatory Network Model That Recovers the Cyclic Behavior of Arabidopsis thaliana Cell Cycle E Ortiz-Gutiérrez, K García-Cruz, E Azpeitia, A Castillo, MP Sánchez, ... PLoS computational biology 11 (9), e1004486, 2015 | 47 | 2015 |
| Cauliflower fractal forms arise from perturbations of floral gene networks E Azpeitia, G Tichtinsky, M Le Masson, A Serrano-Mislata, J Lucas, ... Science 373 (6551), 192-197, 2021 | 44 | 2021 |
| Multicellularity: origins and evolution JT Bonner Mit Press, 2016 | 34 | 2016 |
| The combination of the functionalities of feedback circuits is determinant for the attractors’ number and size in pathway-like Boolean networks E Azpeitia, S Muñoz, D González-Tokman, ME Martínez-Sánchez, ... Scientific Reports 7 (1), 42023, 2017 | 22 | 2017 |
| Short residence times of DNA-bound transcription factors can reduce gene expression noise and increase the transmission of information in a gene regulation system E Azpeitia, A Wagner Frontiers in molecular biosciences 7, 67, 2020 | 20 | 2020 |
| Fanconi anemia cells with unrepaired DNA damage activate components of the checkpoint recovery process A Rodríguez, L Torres, U Juárez, D Sosa, E Azpeitia, BG Teresa, E Cortés, ... Theoretical Biology and Medical Modelling 12, 1-22, 2015 | 20 | 2015 |
| Development of cell differentiation in the transition to multicellularity: a dynamical modeling approach E Mora Van Cauwelaert, JA Arias Del Angel, M Benítez, EM Azpeitia Frontiers in Microbiology 6, 126561, 2015 | 19 | 2015 |
| Dynamic network-based epistasis analysis: boolean examples E Azpeitia, M Benítez, P Padilla-Longoria, C Espinosa-Soto, ... Frontiers in plant science 2, 11498, 2011 | 19 | 2011 |
| Inference of Boolean networks from gene interaction graphs using a SAT solver DA Rosenblueth, S Muñoz, M Carrillo, E Azpeitia Algorithms for Computational Biology: First International Conference, AlCoB …, 2014 | 17 | 2014 |
| Signaling pathways have an inherent need for noise to acquire information E Azpeitia, EP Balanzario, A Wagner BMC bioinformatics 21 (1), 1-21, 2020 | 15* | 2020 |
| A complex systems approach to Arabidopsis root stem-cell niche developmental mechanisms: from molecules, to networks, to morphogenesis E Azpeitia, ER Alvarez-Buylla Plant molecular biology 80, 351-363, 2012 | 15 | 2012 |
