| MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes GC McAlister, DP Nusinow, MP Jedrychowski, M Wühr, EL Huttlin, ... Analytical chemistry 86 (14), 7150-7158, 2014 | 1246 | 2014 |
| Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses GC McAlister, EL Huttlin, W Haas, L Ting, MP Jedrychowski, JC Rogers, ... Analytical chemistry 84 (17), 7469-7478, 2012 | 656 | 2012 |
| Performance characteristics of electron transfer dissociation mass spectrometry DM Good, M Wirtala, GC McAlister, JJ Coon Molecular & Cellular Proteomics 6 (11), 1942-1951, 2007 | 444 | 2007 |
| Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors DL Swaney, GC McAlister, M Wirtala, JC Schwartz, JEP Syka, JJ Coon Analytical chemistry 79 (2), 477-485, 2007 | 433 | 2007 |
| Decision tree–driven tandem mass spectrometry for shotgun proteomics DL Swaney, GC McAlister, JJ Coon Nature methods 5 (11), 959-964, 2008 | 378 | 2008 |
| Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging CD Wenger, MV Lee, AS Hebert, GC McAlister, DH Phanstiel, ... Nature methods 8 (11), 933-935, 2011 | 282 | 2011 |
| Comprehensive single-shot proteomics with FAIMS on a hybrid orbitrap mass spectrometer AS Hebert, S Prasad, MW Belford, DJ Bailey, GC McAlister, SE Abbatiello, ... Analytical Chemistry 90 (15), 9529-9537, 2018 | 257 | 2018 |
| Implementation of electron-transfer dissociation on a hybrid linear ion trap− orbitrap mass spectrometer GC McAlister, D Phanstiel, DM Good, WT Berggren, JJ Coon Analytical chemistry 79 (10), 3525-3534, 2007 | 209 | 2007 |
| Mass spectrometry identifies and quantifies 74 unique histone H4 isoforms in differentiating human embryonic stem cells D Phanstiel, J Brumbaugh, WT Berggren, K Conard, X Feng, ... Proceedings of the National Academy of Sciences 105 (11), 4093-4098, 2008 | 205 | 2008 |
| Characterization and optimization of multiplexed quantitative analyses using high-field asymmetric-waveform ion mobility mass spectrometry DK Schweppe, S Prasad, MW Belford, J Navarrete-Perea, DJ Bailey, ... Analytical chemistry 91 (6), 4010-4016, 2019 | 178 | 2019 |
| The membrane stress response buffers lethal effects of lipid disequilibrium by reprogramming the protein homeostasis network G Thibault, G Shui, W Kim, GC McAlister, N Ismail, SP Gygi, MR Wenk, ... Molecular cell 48 (1), 16-27, 2012 | 168 | 2012 |
| Evaluating multiplexed quantitative phosphopeptide analysis on a hybrid quadrupole mass filter/linear ion trap/orbitrap mass spectrometer BK Erickson, MP Jedrychowski, GC McAlister, RA Everley, R Kunz, ... Analytical chemistry 87 (2), 1241-1249, 2015 | 166 | 2015 |
| Accurate multiplexed proteomics at the MS2 level using the complement reporter ion cluster M Wühr, W Haas, GC McAlister, L Peshkin, R Rad, MW Kirschner, ... Analytical chemistry 84 (21), 9214-9221, 2012 | 164 | 2012 |
| A proteomics grade electron transfer dissociation-enabled hybrid linear ion trap-orbitrap mass spectrometer GC McAlister, WT Berggren, J Griep-Raming, S Horning, A Makarov, ... Journal of proteome research 7 (8), 3127-3136, 2008 | 163 | 2008 |
| Combining native and ‘omics’ mass spectrometry to identify endogenous ligands bound to membrane proteins J Gault, I Liko, M Landreh, D Shutin, JR Bolla, D Jefferies, M Agasid, ... Nature methods 17 (5), 505-508, 2020 | 140 | 2020 |
| The nuclear proteome of a vertebrate M Wühr, T Güttler, L Peshkin, GC McAlister, M Sonnett, K Ishihara, ... Current biology 25 (20), 2663-2671, 2015 | 138 | 2015 |
| A strategy to combine sample multiplexing with targeted proteomics assays for high-throughput protein signature characterization BK Erickson, CM Rose, CR Braun, AR Erickson, J Knott, GC McAlister, ... Molecular cell 65 (2), 361-370, 2017 | 135 | 2017 |
| Infrared photo-activation reduces peptide folding and hydrogen atom migration following ETD tandem mass spectrometry AR Ledvina, GC McAlister, MW Gardener, SI Smith, JA Madsen, ... Angewandte Chemie (International ed. in English) 48 (45), 8526, 2009 | 113 | 2009 |
| Post-acquisition ETD spectral processing for increased peptide identifications DM Good, CD Wenger, GC McAlister, DL Bai, DF Hunt, JJ Coon Journal of the American Society for Mass Spectrometry 20, 1435-1440, 2009 | 79 | 2009 |
| Peptide quantification using 8-plex isobaric tags and electron transfer dissociation tandem mass spectrometry D Phanstiel, R Unwin, GC McAlister, JJ Coon Analytical chemistry 81 (4), 1693-1698, 2009 | 78 | 2009 |
Joshua J. CoonProfessor of Chemistry and Biomolecular Chemistry, U. Of WisconsinVerified email at chem.wisc.edu
