| Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter-and intracontinental transmission events VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ... Nature genetics 47 (6), 632-639, 2015 | 398 | 2015 |
| Approaches to querying bacterial genomes with transposon-insertion sequencing L Barquist, CJ Boinett, AK Cain RNA biology 10 (7), 1161-1169, 2013 | 157 | 2013 |
| The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries L Barquist, M Mayho, C Cummins, AK Cain, CJ Boinett, AJ Page, ... Bioinformatics 32 (7), 1109-1111, 2016 | 131 | 2016 |
| High-throughput analysis of gene essentiality and sporulation in Clostridium difficile M Dembek, L Barquist, CJ Boinett, AK Cain, M Mayho, TD Lawley, ... MBio 6 (2), e02383-14, 2015 | 130 | 2015 |
| An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid VK Wong, S Baker, TR Connor, D Pickard, AJ Page, J Dave, N Murphy, ... Nature communications 7 (1), 1-11, 2016 | 117 | 2016 |
| A decade of advances in transposon-insertion sequencing AK Cain, L Barquist, AL Goodman, IT Paulsen, J Parkhill, T van Opijnen Nature Reviews Genetics 21 (9), 526-540, 2020 | 112 | 2020 |
| Transposons related to Tn 1696 in IncHI2 plasmids in multiply antibiotic resistant Salmonella enterica serovar Typhimurium from Australian animals AK Cain, X Liu, SP Djordjevic, RM Hall Microbial Drug Resistance 16 (3), 197-202, 2010 | 99 | 2010 |
| A high‐resolution genomic analysis of multidrug‐resistant hospital outbreaks of Klebsiella pneumoniae H Chung The, A Karkey, D Pham Thanh, CJ Boinett, AK Cain, M Ellington, ... EMBO molecular medicine 7 (3), 227-239, 2015 | 75 | 2015 |
| Drug resistance in Salmonella enterica ser. Typhimurium bloodstream infection, Malawi NA Feasey, AK Cain, CL Msefula, D Pickard, M Alaerts, M Aslett, ... Emerging infectious diseases 20 (11), 1957, 2014 | 64 | 2014 |
| An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria AG Elliott, JX Huang, S Neve, J Zuegg, IA Edwards, AK Cain, CJ Boinett, ... Nature communications 11 (1), 1-13, 2020 | 57 | 2020 |
| The secondary resistome of multidrug-resistant Klebsiella pneumoniae B Jana, AK Cain, WT Doerrler, CJ Boinett, MC Fookes, J Parkhill, ... Scientific reports 7 (1), 1-10, 2017 | 54 | 2017 |
| Evolution of a multiple antibiotic resistance region in IncHI1 plasmids: reshaping resistance regions in situ AK Cain, RM Hall Journal of antimicrobial chemotherapy 67 (12), 2848-2853, 2012 | 51 | 2012 |
| Evolution of IncHI2 plasmids via acquisition of transposons carrying antibiotic resistance determinants AK Cain, RM Hall Journal of antimicrobial chemotherapy 67 (5), 1121-1127, 2012 | 47 | 2012 |
| Genomic landscape of extended-spectrum β-lactamase resistance in Escherichia coli from an urban African setting P Musicha, NA Feasey, AK Cain, T Kallonen, C Chaguza, C Peno, ... Journal of Antimicrobial Chemotherapy 72 (6), 1602-1609, 2017 | 40 | 2017 |
| Emergence and Evolution of Multiply Antibiotic-Resistant Salmonella enterica Serovar Paratyphi B d-Tartrate-Utilizing Strains Containing SGI1 SP Djordjevic, AK Cain, NJ Evershed, L Falconer, RS Levings, D Lightfoot, ... Antimicrobial agents and chemotherapy 53 (6), 2319-2326, 2009 | 31 | 2009 |
| The Murray collection of pre-antibiotic era Enterobacteriacae: a unique research resource KS Baker, E Burnett, H McGregor, A Deheer-Graham, C Boinett, ... Genome medicine 7 (1), 1-7, 2015 | 30 | 2015 |
| Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages P Musicha, CL Msefula, AE Mather, C Chaguza, AK Cain, C Peno, ... Journal of Antimicrobial Chemotherapy 74 (5), 1223-1232, 2019 | 28 | 2019 |
| Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii CJ Boinett, AK Cain, J Hawkey, NT Do Hoang, NNT Khanh, DP Thanh, ... Microbial genomics 5 (2), 2019 | 27 | 2019 |
| Fluorescence-based flow sorting in parallel with transposon insertion site sequencing identifies multidrug efflux systems in Acinetobacter baumannii KA Hassan, AK Cain, TT Huang, Q Liu, LDH Elbourne, CJ Boinett, ... MBio 7 (5), e01200-16, 2016 | 26 | 2016 |
| Transposon Tn5393e Carrying the aphA1-Containing Transposon Tn6023 Upstream of strAB Does Not Confer Resistance to Streptomycin AK Cain, RM Hall Microbial Drug Resistance 17 (3), 389-394, 2011 | 25 | 2011 |
Lars BarquistHelmholtz Institute for RNA-based Infection ResearchVerified email at helmholtz-hiri.de
