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Amy K. Cain
Amy K. Cain
ARC DECRA Research Fellow, Dept of Molecular Sciences, Macquarie University, Sydney, Australia
Verified email at mq.edu.au - Homepage
Title
Cited by
Cited by
Year
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter-and intracontinental transmission events
VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ...
Nature genetics 47 (6), 632-639, 2015
3982015
Approaches to querying bacterial genomes with transposon-insertion sequencing
L Barquist, CJ Boinett, AK Cain
RNA biology 10 (7), 1161-1169, 2013
1572013
The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries
L Barquist, M Mayho, C Cummins, AK Cain, CJ Boinett, AJ Page, ...
Bioinformatics 32 (7), 1109-1111, 2016
1312016
High-throughput analysis of gene essentiality and sporulation in Clostridium difficile
M Dembek, L Barquist, CJ Boinett, AK Cain, M Mayho, TD Lawley, ...
MBio 6 (2), e02383-14, 2015
1302015
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
VK Wong, S Baker, TR Connor, D Pickard, AJ Page, J Dave, N Murphy, ...
Nature communications 7 (1), 1-11, 2016
1172016
A decade of advances in transposon-insertion sequencing
AK Cain, L Barquist, AL Goodman, IT Paulsen, J Parkhill, T van Opijnen
Nature Reviews Genetics 21 (9), 526-540, 2020
1122020
Transposons related to Tn 1696 in IncHI2 plasmids in multiply antibiotic resistant Salmonella enterica serovar Typhimurium from Australian animals
AK Cain, X Liu, SP Djordjevic, RM Hall
Microbial Drug Resistance 16 (3), 197-202, 2010
992010
A high‐resolution genomic analysis of multidrug‐resistant hospital outbreaks of Klebsiella pneumoniae
H Chung The, A Karkey, D Pham Thanh, CJ Boinett, AK Cain, M Ellington, ...
EMBO molecular medicine 7 (3), 227-239, 2015
752015
Drug resistance in Salmonella enterica ser. Typhimurium bloodstream infection, Malawi
NA Feasey, AK Cain, CL Msefula, D Pickard, M Alaerts, M Aslett, ...
Emerging infectious diseases 20 (11), 1957, 2014
642014
An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria
AG Elliott, JX Huang, S Neve, J Zuegg, IA Edwards, AK Cain, CJ Boinett, ...
Nature communications 11 (1), 1-13, 2020
572020
The secondary resistome of multidrug-resistant Klebsiella pneumoniae
B Jana, AK Cain, WT Doerrler, CJ Boinett, MC Fookes, J Parkhill, ...
Scientific reports 7 (1), 1-10, 2017
542017
Evolution of a multiple antibiotic resistance region in IncHI1 plasmids: reshaping resistance regions in situ
AK Cain, RM Hall
Journal of antimicrobial chemotherapy 67 (12), 2848-2853, 2012
512012
Evolution of IncHI2 plasmids via acquisition of transposons carrying antibiotic resistance determinants
AK Cain, RM Hall
Journal of antimicrobial chemotherapy 67 (5), 1121-1127, 2012
472012
Genomic landscape of extended-spectrum β-lactamase resistance in Escherichia coli from an urban African setting
P Musicha, NA Feasey, AK Cain, T Kallonen, C Chaguza, C Peno, ...
Journal of Antimicrobial Chemotherapy 72 (6), 1602-1609, 2017
402017
Emergence and Evolution of Multiply Antibiotic-Resistant Salmonella enterica Serovar Paratyphi B d-Tartrate-Utilizing Strains Containing SGI1
SP Djordjevic, AK Cain, NJ Evershed, L Falconer, RS Levings, D Lightfoot, ...
Antimicrobial agents and chemotherapy 53 (6), 2319-2326, 2009
312009
The Murray collection of pre-antibiotic era Enterobacteriacae: a unique research resource
KS Baker, E Burnett, H McGregor, A Deheer-Graham, C Boinett, ...
Genome medicine 7 (1), 1-7, 2015
302015
Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages
P Musicha, CL Msefula, AE Mather, C Chaguza, AK Cain, C Peno, ...
Journal of Antimicrobial Chemotherapy 74 (5), 1223-1232, 2019
282019
Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii
CJ Boinett, AK Cain, J Hawkey, NT Do Hoang, NNT Khanh, DP Thanh, ...
Microbial genomics 5 (2), 2019
272019
Fluorescence-based flow sorting in parallel with transposon insertion site sequencing identifies multidrug efflux systems in Acinetobacter baumannii
KA Hassan, AK Cain, TT Huang, Q Liu, LDH Elbourne, CJ Boinett, ...
MBio 7 (5), e01200-16, 2016
262016
Transposon Tn5393e Carrying the aphA1-Containing Transposon Tn6023 Upstream of strAB Does Not Confer Resistance to Streptomycin
AK Cain, RM Hall
Microbial Drug Resistance 17 (3), 389-394, 2011
252011
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