Elena Harris
Elena Harris
Verified email at csuchico.edu
Cited by
Cited by
Nucleosome landscape and control of transcription in the human malaria parasite
N Ponts, EY Harris, J Prudhomme, I Wick, C Eckhardt-Ludka, GR Hicks, ...
Genome research 20 (2), 228-238, 2010
Molecular hierarchy of mammary differentiation yields refined markers of mammary stem cells
CO dos Santos, C Rebbeck, E Rozhkova, A Valentine, A Samuels, ...
Proceedings of the National Academy of Sciences 110 (18), 7123-7130, 2013
BRAT-BW: efficient and accurate mapping of bisulfite-treated reads
EY Harris, N Ponts, KG Le Roch, S Lonardi
Bioinformatics 28 (13), 1795-1796, 2012
BRAT: bisulfite-treated reads analysis tool
EY Harris, N Ponts, A Levchuk, KL Roch, S Lonardi
bioinformatics 26 (4), 572-573, 2010
Genome-wide Mapping of DNA Methylation in the Human Malaria Parasite Plasmodium falciparum
N Ponts, L Fu, EY Harris, J Zhang, DWD Chung, MC Cervantes, ...
Cell host & microbe 14 (6), 696-706, 2013
Exploration of short reads genome mapping in hardware
E Fernandez, W Najjar, E Harris, S Lonardi
2010 International Conference on Field Programmable Logic and Applications …, 2010
Nucleosome occupancy at transcription start sites in the human malaria parasite: a hard-wired evolution of virulence?
N Ponts, EY Harris, S Lonardi, KG Le Roch
Infection, Genetics and Evolution 11 (4), 716-724, 2011
Zebrafish embryonic stromal trunk (ZEST) cells support hematopoietic stem and progenitor cell (HSPC) proliferation, survival, and differentiation
C Campbell, T Su, RP Lau, A Shah, PC Laurie, B Avalos, J Aggio, ...
Experimental hematology 43 (12), 1047-1061, 2015
BRAT-nova: fast and accurate mapping of bisulfite-treated reads
EY Harris, R Ounit, S Lonardi
Bioinformatics 32 (17), 2696-2698, 2016
Chromatin-driven de novo discovery of DNA binding motifs in the human malaria parasite
EY Harris, N Ponts, KG Le Roch, S Lonardi
BMC genomics 12 (1), 1-14, 2011
Isthmin 1 (ism1) is required for normal hematopoiesis in developing zebrafish
A Berrun, E Harris, DL Stachura
Plos one 13 (5), e0196872, 2018
Bioinformatics Sister Courses: An Interdisciplinary Collaborative Learning Framework to Teach Bioinformatics
EY Harris, D Keller, D Stachura, G Wolfe
2016 International Conference on Computational Science and Computational …, 2016
Bisulfite‐Conversion‐Based Methods for DNA Methylation Sequencing Data Analysis
E Harris, S Lonardi
Computational Methods for Next Generation Sequencing Data Analysis, 227-243, 2016
Genome-scale discovery of DNA methylations in the malaria parasite
N Ponts, EY Harris, DWD Chung, Z Jing, J Prudhomme, EM Rodrigues, ...
1. Annual SoCal Systems Biology Conference, 2011
Novel gene discovery in the human malaria parasite using nucleosome positioning data
N Pokhriyal, N Ponts, EY Harris, KG Le Roch, S Lonardi
Computational systems bioinformatics/Life Sciences Society. Computational …, 2010
CPM’s 20th anniversary: A statistical retrospective
EY Harris, T Lecroq, G Kucherov, S Lonardi
Annual Symposium on Combinatorial Pattern Matching, 1-11, 2009
Practical Space-efficient Linear Time Construction of FM-index for Large Genomes
E Harris
10th International Conference on Bioinformatics and Computational Biology …, 2018
An integrated view of the human malaria parasite's epigenome
N Ponts, EY Harris, DWD Chung, J Prudhomme, A Saraf, L Florens, ...
22. Molecular Parasitology Meeting, 2011
Using next-generation sequencing to study DNA methylation in the human malaria parasite
N Ponts, EY Harris, J Prudhomme, GR Hicks, S Lonardi, KG Le Roch
Illumina User Meeting, 2010
Computational methods for epigenetic studies
EY Harris
UC Riverside, 2010
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