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Ilya Soifer
Ilya Soifer
Ultima Genomics
Verified email at ultimagen.com
Title
Cited by
Cited by
Year
High-resolution genetic mapping of maize pan-genome sequence anchors
F Lu, MC Romay, JC Glaubitz, PJ Bradbury, RJ Elshire, T Wang, Y Li, Y Li, ...
Nature communications 6 (1), 1-8, 2015
2302015
The maize W22 genome provides a foundation for functional genomics and transposon biology
NM Springer, SN Anderson, CM Andorf, KR Ahern, F Bai, O Barad, ...
Nature genetics 50 (9), 1282-1288, 2018
2152018
Single-cell analysis of growth in budding yeast and bacteria reveals a common size regulation strategy
I Soifer, L Robert, A Amir
Current Biology 26 (3), 356-361, 2016
2152016
Principles of cellular resource allocation revealed by condition-dependent proteome profiling
E Metzl-Raz, M Kafri, G Yaakov, I Soifer, Y Gurvich, N Barkai
Elife 6, e28034, 2017
2112017
Draft assembly of elite inbred line PH207 provides insights into genomic and transcriptome diversity in maize
CN Hirsch, CD Hirsch, AB Brohammer, MJ Bowman, I Soifer, O Barad, ...
The Plant Cell 28 (11), 2700-2714, 2016
1992016
MANF regulates metabolic and immune homeostasis in ageing and protects against liver damage
P Sousa-Victor, J Neves, W Cedron-Craft, PB Ventura, CY Liao, RR Riley, ...
Nature metabolism 1 (2), 276-290, 2019
1172019
MRC1-dependent scaling of the budding yeast DNA replication timing program
A Koren, I Soifer, N Barkai
Genome research 20 (6), 781-790, 2010
872010
Systematic identification of cell size regulators in budding yeast
I Soifer, N Barkai
Molecular systems biology 10 (11), 761, 2014
842014
Modeling Multiplexed Images with Spatial-LDA Reveals Novel Tissue Microenvironments
Z Chen, I Soifer, H Hilton, L Keren, V Jojic
Journal of Computational Biology 27 (8), 1204-1218, 2020
702020
A new experimental platform facilitates assessment of the transcriptional and chromatin landscapes of aging yeast
DG Hendrickson, I Soifer, BJ Wranik, G Kim, M Robles, PA Gibney, ...
elife 7, e39911, 2018
662018
Novel insights from a multiomics dissection of the Hayflick limit
M Chan, H Yuan, I Soifer, TM Maile, RY Wang, A Ireland, JJ O'Brien, ...
Elife 11, e70283, 2022
592022
Unraveling the message: insights into comparative genomics of the naked mole-rat
KN Lewis, I Soifer, E Melamud, M Roy, RS McIsaac, M Hibbs, ...
Mammalian Genome 27, 259-278, 2016
522016
Heterosis as a consequence of regulatory incompatibility
RH Herbst, D Bar-Zvi, S Reikhav, I Soifer, M Breker, G Jona, E Shimoni, ...
BMC biology 15, 1-15, 2017
492017
Cost-efficient whole genome-sequencing using novel mostly natural sequencing-by-synthesis chemistry and open fluidics platform
G Almogy, M Pratt, F Oberstrass, L Lee, D Mazur, N Beckett, O Barad, ...
BioRxiv, 2022.05. 29.493900, 2022
412022
Increasing population growth by asymmetric segregation of a limiting resource during cell division
N Avraham, I Soifer, M Carmi, N Barkai
Molecular systems biology 9 (1), 656, 2013
262013
Simultaneous profiling of DNA accessibility and gene expression dynamics with ATAC-seq and RNA-seq
DG Hendrickson, I Soifer, BJ Wranik, D Botstein, R Scott McIsaac
Computational Cell Biology: Methods and Protocols, 317-333, 2018
242018
Ndel1-derived peptides modulate bidirectional transport of injected beads in the squid giant axon
M Segal, I Soifer, H Petzold, J Howard, M Elbaum, O Reiner
Biology open 1 (3), 220-231, 2012
182012
A visual framework for classifying determinants of cell size
F Jonas, I Soifer, N Barkai
Cell reports 25 (12), 3519-3529. e2, 2018
112018
Fully Phased Sequence of a Diploid Human Genome Determined de Novo from the DNA of a Single Individual
L Soifer, NL Fong, N Yi, AT Ireland, I Lam, M Sooknah, JS Paw, P Peluso, ...
G3: Genes, Genomes, Genetics 10 (9), 2911-2925, 2020
102020
Loss of major nutrient sensing and signaling pathways suppresses starvation lethality in electron transport chain mutants
AG Lewis, R Caldwell, JV Rogers, M Ingaramo, RY Wang, I Soifer, ...
Molecular Biology of the Cell 32 (22), ar39, 2021
42021
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Articles 1–20