Jon McAuliffe
Jon McAuliffe
Professor (Adj.) of Statistics, University of California, Berkeley
Verified email at stat.berkeley.edu
Title
Cited by
Cited by
Year
Supervised topic models
DM Blei, JD McAuliffe
Arxiv preprint arXiv:1003.0783, 2010
1729*2010
Variational inference: A review for statisticians
DM Blei, A Kucukelbir, JD McAuliffe
Journal of the American Statistical Association 112 (518), 859-877, 2017
14072017
Convexity, classification, and risk bounds
PL Bartlett, MI Jordan, JD McAuliffe
Journal of the American Statistical Association 101 (473), 138-156, 2006
11942006
Phylogenetic shadowing of primate sequences to find functional regions of the human genome
D Boffelli, J McAuliffe, D Ovcharenko, KD Lewis, I Ovcharenko, L Pachter, ...
Science 299 (5611), 1391-1394, 2003
6372003
Candidate cell and matrix interaction domains on the collagen fibril, the predominant protein of vertebrates
SM Sweeney, JP Orgel, A Fertala, JD McAuliffe, KR Turner, GA Di Lullo, ...
Journal of Biological Chemistry 283 (30), 21187-21197, 2008
2442008
Toward a protein profile of Escherichia coli: comparison to its transcription profile
RW Corbin, O Paliy, F Yang, J Shabanowitz, M Platt, CE Lyons, K Root, ...
Proceedings of the National Academy of Sciences 100 (16), 9232-9237, 2003
2132003
Variational inference for large-scale models of discrete choice
M Braun, J McAuliffe
Journal of the American Statistical Association 105 (489), 324-335, 2010
1372010
Nonparametric empirical Bayes for the Dirichlet process mixture model
JD McAuliffe, DM Blei, MI Jordan
Statistics and Computing 16 (1), 5-14, 2006
1262006
Sulfur and nitrogen limitation in Escherichia coli K-12: specific homeostatic responses
P Gyaneshwar, O Paliy, J McAuliffe, DL Popham, MI Jordan, S Kustu
Journal of bacteriology 187 (3), 1074-1090, 2005
952005
Multiple-sequence functional annotation and the generalized hidden Markov phylogeny
JD McAuliffe, L Pachter, MI Jordan
Bioinformatics 20 (12), 1850-1860, 2004
752004
Lessons from Escherichia coli genes similarly regulated in response to nitrogen and sulfur limitation
P Gyaneshwar, O Paliy, J McAuliffe, A Jones, MI Jordan, S Kustu
Proceedings of the National Academy of Sciences 102 (9), 3453-3458, 2005
492005
Uniform, nonparametric, non-asymptotic confidence sequences
SR Howard, A Ramdas, J McAuliffe, J Sekhon
arXiv preprint arXiv:1810.08240, 2018
272018
Celeste: Variational inference for a generative model of astronomical images
J Regier, A Miller, J McAuliffe, R Adams, M Hoffman, D Lang, D Schlegel, ...
Proceedings of the 32nd International Conference on Machine Learning, 2015
242015
Subtree power analysis and species selection for comparative genomics
JD McAuliffe, MI Jordan, L Pachter
Proceedings of the National Academy of Sciences 102 (22), 7900-7905, 2005
202005
Long-and short-term selective forces on malaria parasite genomes
S Nygaard, A Braunstein, G Malsen, S Van Dongen, PP Gardner, A Krogh, ...
PLoS Genet 6 (9), e1001099, 2010
192010
Machine learning in low-level microarray analysis
BIP Rubinstein, J McAuliffe, S Cawley, M Palaniswami, ...
ACM SIGKDD Explorations Newsletter 5 (2), 130-139, 2003
192003
Fast black-box variational inference through stochastic trust-region optimization
J Regier, MI Jordan, J McAuliffe
Advances in Neural Information Processing Systems, 2402-2411, 2017
162017
Exponential line-crossing inequalities
SR Howard, A Ramdas, J McAuliffe, J Sekhon
arXiv preprint arXiv:1808.03204, 2018
132018
GLAD: a mixed-membership model for heterogeneous tumor subtype classification
H Saddiki, J McAuliffe, P Flaherty
Bioinformatics 31 (2), 225-232, 2015
132015
Rao-Blackwellized stochastic gradients for discrete distributions
R Liu, J Regier, N Tripuraneni, M Jordan, J Mcauliffe
International Conference on Machine Learning, 4023-4031, 2019
122019
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Articles 1–20